ArchDB - Biological DataBase of Protein Loops

Information on 1qo8_A_5

Loop code: 1qo8_A_5
PDB: 1qo8
Chain: A
Type: HH alpha-alpha

Loop Start: 5 Loop Length: 17
Sec Struct Nt length: 8 Sec Struct Ct length: 11
Structure geometry

d (Å): 19.647900

delta (°): 129.002197

theta (°): 57.442402

rho (°): 336.572388

Sequence:	MGSFHADMGSCQSCHAKPIKVTDSETHENAQCKSCH
Sec Struct:	HHHHHHHHS-GGGTS-SS----TT-HHHHHHHHHHH

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
HEMPROTOPORPHYRIN IX CONTAINING FE	M - 5	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	G - 6	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	S - 7	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	F - 8	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	H - 9	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	A - 10	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	M - 12	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	S - 14	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	C - 15	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	Q - 16	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	S - 17	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	C - 18	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	H - 19	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	I - 23	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	V - 25	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	E - 29	0	1
HEMPROTOPORPHYRIN IX CONTAINING FE	E - 32	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	N - 33	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	Q - 35	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	C - 36	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	K - 37	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	S - 38	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	C - 39	1	0
HEMPROTOPORPHYRIN IX CONTAINING FE	H - 40	1	0

PDB Site Annotation

Site	Residue	atSS	atLOOP
AC3 - HEM BINDING SITE FOR RESDIUE A603	M - 5	1	0
AC4 - HEM BINDING SITE FOR RESDIUE A604	G - 6	1	0
AC3 - HEM BINDING SITE FOR RESDIUE A603	H - 9	1	0
AC4 - HEM BINDING SITE FOR RESDIUE A604	H - 9	1	0
AC4 - HEM BINDING SITE FOR RESDIUE A604	C - 15	0	1
AC4 - HEM BINDING SITE FOR RESDIUE A604	C - 18	0	1
AC4 - HEM BINDING SITE FOR RESDIUE A604	H - 19	0	1
AC4 - HEM BINDING SITE FOR RESDIUE A604	E - 29	0	1
AC3 - HEM BINDING SITE FOR RESDIUE A603	C - 36	1	0
AC3 - HEM BINDING SITE FOR RESDIUE A603	C - 39	1	0