Information on 1upa_A_484 |
Loop code: 1upa_A_484 PDB: 1upa Chain: A Type: EH beta-alpha |
Loop Start: 484 Loop Length: 4 Sec Struct Nt length: 6 Sec Struct Ct length: 11 Structure geometry
|
Sequence: | VTVVVNNDTNGLIELYQNIGH |
Sec Struct: | EEEEEE-SB-HHHHHHHHHHH |
PDB ligands within a cut-off distance of 6 Å in this loop |
Ligands | Residue | atSS | atLOOP |
MSESELENOMETHIONINE | V - 484 | 1 | 0 |
MSESELENOMETHIONINE | V - 486 | 1 | 0 |
MGMAGNESIUM ION | V - 488 | 0 | 1 |
TPPTHIAMINE DIPHOSPHATE | V - 488 | 0 | 1 |
MGMAGNESIUM ION | N - 489 | 0 | 1 |
MGMAGNESIUM ION | N - 490 | 0 | 1 |
TPPTHIAMINE DIPHOSPHATE | N - 490 | 0 | 1 |
MGMAGNESIUM ION | D - 491 | 0 | 1 |
MGMAGNESIUM ION | T - 492 | 0 | 1 |
TPPTHIAMINE DIPHOSPHATE | T - 492 | 0 | 1 |
MGMAGNESIUM ION | N - 493 | 0 | 1 |
TPPTHIAMINE DIPHOSPHATE | N - 493 | 0 | 1 |
MGMAGNESIUM ION | G - 494 | 0 | 1 |
TPPTHIAMINE DIPHOSPHATE | G - 494 | 0 | 1 |
TPPTHIAMINE DIPHOSPHATE | L - 495 | 1 | 0 |
TPPTHIAMINE DIPHOSPHATE | I - 496 | 1 | 0 |
PDB Site Annotation |
Site | Residue | atSS | atLOOP |
AC2MG BINDING SITE FOR CHAIN A | N - 490 | 0 | 1 |
AC4SO4 BINDING SITE FOR CHAIN A | N - 490 | 0 | 1 |
AC1TPP BINDING SITE FOR CHAIN A | T - 492 | 0 | 1 |
AC2MG BINDING SITE FOR CHAIN A | T - 492 | 0 | 1 |
AC1TPP BINDING SITE FOR CHAIN A | N - 493 | 0 | 1 |
AC3SO4 BINDING SITE FOR CHAIN A | L - 495 | 1 | 0 |
Associated ArchDB40 Subclass to 1upa_A_484 |
Associated ArchDB95 Subclass to 1upa_A_484 |