ArchDB - Biological DataBase of Protein Loops

Grup de Recerca en Informàtica Biomèdica

Information on 1jb0_A_485

Loop code: 1jb0_A_485
PDB: 1jb0
Chain: A
Type: HE alpha-beta

Loop Start: 485 Loop Length: 21
Sec Struct Nt length: 12 Sec Struct Ct length: 3
Structure geometry

d (Å): 16.936199

delta (°): 84.730202

theta (°): 74.980003

rho (°): 66.421097

Sequence:	VFAQWVQNLHTLAPGGTAPNAAATASVAFGGDVVAV
Sec Struct:	HHHHHHHHHHHHTBTTTBTT-SS-S-TTSSS--EEE

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
CACALCIUM ION	V - 485	1	0
CL1ALPHA CHLOROPHYLL A	V - 485	1	0
CACALCIUM ION	F - 486	1	0
CL1ALPHA CHLOROPHYLL A	F - 486	1	0
CACALCIUM ION	A - 487	1	0
CL1ALPHA CHLOROPHYLL A	A - 487	1	0
CL1ALPHA CHLOROPHYLL A	Q - 488	1	0
CACALCIUM ION	W - 489	1	0
CL1ALPHA CHLOROPHYLL A	W - 489	1	0
CACALCIUM ION	V - 490	1	0
CL1ALPHA CHLOROPHYLL A	V - 490	1	0
CACALCIUM ION	Q - 491	1	0
CL1ALPHA CHLOROPHYLL A	Q - 491	1	0
CACALCIUM ION	L - 493	1	0
CL1ALPHA CHLOROPHYLL A	L - 493	1	0
BCRBETA-CAROTENE	H - 494	1	0
CACALCIUM ION	H - 494	1	0
CL1ALPHA CHLOROPHYLL A	H - 494	1	0
CL1ALPHA CHLOROPHYLL A	T - 495	0	1
CACALCIUM ION	A - 497	0	1
CL1ALPHA CHLOROPHYLL A	A - 497	0	1
CL1ALPHA CHLOROPHYLL A	P - 498	0	1
CACALCIUM ION	G - 500	0	1
CL1ALPHA CHLOROPHYLL A	G - 500	0	1
CACALCIUM ION	T - 501	0	1
CL1ALPHA CHLOROPHYLL A	T - 501	0	1
CACALCIUM ION	A - 502	0	1
CL1ALPHA CHLOROPHYLL A	A - 502	0	1
CACALCIUM ION	P - 503	0	1
CL1ALPHA CHLOROPHYLL A	P - 503	0	1
CACALCIUM ION	N - 504	0	1
CL1ALPHA CHLOROPHYLL A	N - 504	0	1
CL1ALPHA CHLOROPHYLL A	A - 505	0	1
CL1ALPHA CHLOROPHYLL A	A - 507	0	1
CL1ALPHA CHLOROPHYLL A	T - 508	0	1
CACALCIUM ION	A - 509	0	1
CL1ALPHA CHLOROPHYLL A	A - 509	0	1
CACALCIUM ION	S - 510	0	1
CL1ALPHA CHLOROPHYLL A	S - 510	0	1
CACALCIUM ION	A - 512	0	1
CL1ALPHA CHLOROPHYLL A	A - 512	0	1
CACALCIUM ION	F - 513	0	1
CL1ALPHA CHLOROPHYLL A	F - 513	0	1