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Information on 1aym_1_2
Loop code: 1aym_1_2
PDB: 1aym
Chain: 1
Type: HH alpha-alpha
Loop Start: 2  Loop Length: 35
Sec Struct Nt length: 10  Sec Struct Ct length: 4
Structure geometry
d (Å): 28.979300 delta (°): 79.379501theta (°): 71.860100 rho (°): 91.304604
Sequence:PVERYVDEVLNEVLVVPNINQSHPTTSNAAPVLDAAETGHTNKIQPEDT
Sec Struct:HHHHHHHHHHT-SSB---B--------S--TT---GGGS------HHHH
PDB Site Annotation
SiteResidueatSSatLOOP
MYR - MYRISTYLATION IS OBSERVED AT N-TERMINUS OF VP4, WHICH LIES VERY CLOSE TO THE ICOSAHEDRAL FIVE-FOLD AXIS. TYR 1 6 IS HYDROGEN BONDED TO THE N-TERMINUS OF VP4 ALSO, FORMING A LINK BETWEEN THE AMPHIPATHIC HELIX AT THE TERMINUS OF VP1 AND THE 10-STRANDED BETA BARREL OBSERVED AT THE N-TERMINUS OF VP4 (TWO STRANDS, FIVE SYMMETRY RELATED COPIES). Y - 610