Information on 1aym_1_2 |
Loop code: 1aym_1_2 PDB: 1aym Chain: 1 Type: HH alpha-alpha |
Loop Start: 2 Loop Length: 35 Sec Struct Nt length: 10 Sec Struct Ct length: 4 Structure geometry
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Sequence: | PVERYVDEVLNEVLVVPNINQSHPTTSNAAPVLDAAETGHTNKIQPEDT |
Sec Struct: | HHHHHHHHHHT-SSB---B--------S--TT---GGGS------HHHH |
PDB Site Annotation |
Site | Residue | atSS | atLOOP |
MYR - MYRISTYLATION IS OBSERVED AT N-TERMINUS OF VP4, WHICH LIES VERY CLOSE TO THE ICOSAHEDRAL FIVE-FOLD AXIS. TYR 1 6 IS HYDROGEN BONDED TO THE N-TERMINUS OF VP4 ALSO, FORMING A LINK BETWEEN THE AMPHIPATHIC HELIX AT THE TERMINUS OF VP1 AND THE 10-STRANDED BETA BARREL OBSERVED AT THE N-TERMINUS OF VP4 (TWO STRANDS, FIVE SYMMETRY RELATED COPIES). | Y - 6 | 1 | 0 |