ArchDB - Biological DataBase of Protein Loops

Information on 1gpu_A_62

Loop code: 1gpu_A_62
PDB: 1gpu
Chain: A
Type: EH beta-alpha

Loop Start: 62 Loop Length: 5
Sec Struct Nt length: 4 Sec Struct Ct length: 10
Structure geometry

d (Å): 9.342500

delta (°): 65.212196

theta (°): 152.528900

rho (°): 102.354698

Sequence:	RFVLSNGHAVALLYSMLHL
Sec Struct:	EEEESSGGGHHHHHHHHHH

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	N - 67	0	1
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	G - 68	0	1
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	H - 69	0	1
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	A - 70	0	1

PDB Site Annotation

Site	Residue	atSS	atLOOP
AC2THD BINDING SITE FOR CHAIN A	H - 69	0	1

Associated ArchDB40 Subclass to 1gpu_A_62

Associated ArchDB95 Subclass to 1gpu_A_62

Associated ArchDB-EC Subclass to 1gpu_A_62