PDB: 1a1r Compound: ns3 protein Classification: VIRAL PROTEIN Entry date in PDB: 1998-06-17 Resolution [Å]: 2.50 R-Factor: 0.216

CHAIN: A SWISS-PROT/TREMBL: P27958    KEYWORD: 3D-structure    ATP-binding    Coat protein    Core protein    Envelope protein    Glycoprotein    Helicase    Hydrolase    Nonstructural protein    Polyprotein    RNA-directed RNA polymerase    Serine protease    Transferase    Transmembrane    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NS3 protease    Human hepatitis C virus (HCV), different isolates GO:  viral capsid    viral envelope    ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding    RNA binding    RNA-directed RNA polymerase activity    serine-type peptidase activity    structural molecule activity    proteolysis and peptidolysis    transcription    viral genome replication    viral transformation    CHAIN: B SWISS-PROT/TREMBL: P27958    KEYWORD: 3D-structure    ATP-binding    Coat protein    Core protein    Envelope protein    Glycoprotein    Helicase    Hydrolase    Nonstructural protein    Polyprotein    RNA-directed RNA polymerase    Serine protease    Transferase    Transmembrane    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NS3 protease    Human hepatitis C virus (HCV), different isolates GO:  viral capsid    viral envelope    ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding    RNA binding    RNA-directed RNA polymerase activity    serine-type peptidase activity    structural molecule activity    proteolysis and peptidolysis    transcription    viral genome replication    viral transformation    CHAIN: C SWISS-PROT/TREMBL: P27958    KEYWORD: 3D-structure    ATP-binding    Coat protein    Core protein    Envelope protein    Glycoprotein    Helicase    Hydrolase    Nonstructural protein    Polyprotein    RNA-directed RNA polymerase    Serine protease    Transferase    Transmembrane    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NS3 protease    Human hepatitis C virus (HCV), different isolates GO:  viral capsid    viral envelope    ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding    RNA binding    RNA-directed RNA polymerase activity    serine-type peptidase activity    structural molecule activity    proteolysis and peptidolysis    transcription    viral genome replication    viral transformation    CHAIN: D SWISS-PROT/TREMBL: P27958    KEYWORD: 3D-structure    ATP-binding    Coat protein    Core protein    Envelope protein    Glycoprotein    Helicase    Hydrolase    Nonstructural protein    Polyprotein    RNA-directed RNA polymerase    Serine protease    Transferase    Transmembrane    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NS3 protease    Human hepatitis C virus (HCV), different isolates GO:  viral capsid    viral envelope    ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding    RNA binding    RNA-directed RNA polymerase activity    serine-type peptidase activity    structural molecule activity    proteolysis and peptidolysis    transcription    viral genome replication    viral transformation

Image Source: PDB

Loops in ArchDB-EC clusters

1a1r_A_129 - HA => SUBCLASS : 5.1.6

Loops not clustered in ArchDB

1a1r_A_108 - AR
1a1r_A_77 - EH
1a1r_A_149 - EH
1a1r_A_189 - EH
1a1r_A_168 - HA
1a1r_A_139 - HA
1a1r_A_101 - HA
1a1r_A_68 - HA
1a1r_A_59 - HA
1a1r_A_176 - HA
1a1r_A_158 - HE
1a1r_A_82 - HE

1a1q A - percentage of sequence identity: 89
1a1q B - percentage of sequence identity: 89
1a1q C - percentage of sequence identity: 89
1a1r A - percentage of sequence identity: 100
1a1r B - percentage of sequence identity: 100
1bt7 - - percentage of sequence identity: 89
1cu1 A - percentage of sequence identity: 89
1cu1 B - percentage of sequence identity: 89
1dxp A - percentage of sequence identity: 88
1dxp B - percentage of sequence identity: 88
1dxw A - percentage of sequence identity: 89
1dy8 A - percentage of sequence identity: 88
1dy8 B - percentage of sequence identity: 88
1dy9 A - percentage of sequence identity: 88
1dy9 B - percentage of sequence identity: 88
1jxp A - percentage of sequence identity: 89
1jxp B - percentage of sequence identity: 89
1n1l A - percentage of sequence identity: 98
1n1l B - percentage of sequence identity: 98
1ns3 A - percentage of sequence identity: 89
1ns3 B - percentage of sequence identity: 89
1rgq A - percentage of sequence identity: 98
1rgq B - percentage of sequence identity: 98
1rtl A - percentage of sequence identity: 98
1rtl B - percentage of sequence identity: 98
1w3c A - percentage of sequence identity: 88
1w3c B - percentage of sequence identity: 88
2fm2 A - percentage of sequence identity: 99
2fm2 C - percentage of sequence identity: 99
null nu - percentage of sequence identity: 0