ArchDB - Biological DataBase of Protein Loops

Information on 1a2p

PDB: 1a2p
Compound: barnase
Classification: RIBONUCLEASE
Entry date in PDB: 1998-04-29
Resolution [Å]: 1.50
R-Factor: 0.115

CHAIN: A

SWISS-PROT/TREMBL: P00648
   KEYWORD: 3D-structure    Endonuclease    Genetically modified food    Hydrolase    Nuclease    Signal
EC: 3.1.27.-
SCOP: d.1.1.2 Alpha and beta proteins (a+b)    Microbial ribonucleases    Microbial ribonucleases    Bacterial ribonucleases    Barnase    Bacillus amyloliquefaciens
GO:  endoribonuclease activity    RNA binding

CHAIN: B

CHAIN: C

Image Source: PDB

Stored Loops of 1a2p

Loops in ArchDB40 clusters

1a2p_A_87 - HA => SUBCLASS : 4.2.1
1a2p_A_96 - HA => SUBCLASS : 5.19.1
1a2p_A_24 - EH => SUBCLASS : 1.1.1

Loops in ArchDB95 clusters

1a2p_A_24 - EH => SUBCLASS : 1.1.2
1a2p_A_27 - HH => SUBCLASS : 7.19.1
1a2p_A_87 - HA => SUBCLASS : 3.1.2
1a2p_A_87 - HA => SUBCLASS : 4.3.1
1a2p_A_96 - HA => SUBCLASS : 5.15.1

Loops in ArchDB-EC clusters

1a2p_A_96 - HA => SUBCLASS : 5.9.1

Loops not clustered in ArchDB

1a2p_A_50 - HA
1a2p_A_71 - HA
1a2p_A_50 - HA
1a2p_A_71 - HA
1a2p_A_87 - HA
1a2p_A_96 - HA
1a2p_A_7 - HE
1a2p_A_42 - HE

Homologous structures to 1a2p classified in ArchDB

1a2p A - percentage of sequence identity: 100
1a2p B - percentage of sequence identity: 100
1a2p C - percentage of sequence identity: 100
1b20 A - percentage of sequence identity: 99
1b20 B - percentage of sequence identity: 99
1b20 C - percentage of sequence identity: 99
1b21 A - percentage of sequence identity: 98
1b21 B - percentage of sequence identity: 98
1b21 C - percentage of sequence identity: 98
1b27 A - percentage of sequence identity: 100
1b27 B - percentage of sequence identity: 100
1b27 C - percentage of sequence identity: 100
1b2s A - percentage of sequence identity: 99
1b2s B - percentage of sequence identity: 99
1b2s C - percentage of sequence identity: 99
1b2u A - percentage of sequence identity: 99
1b2u B - percentage of sequence identity: 99
1b2u C - percentage of sequence identity: 99
1b2x A - percentage of sequence identity: 100
1b2x B - percentage of sequence identity: 100
1b2x C - percentage of sequence identity: 100
1b2z A - percentage of sequence identity: 99
1b2z B - percentage of sequence identity: 99
1b2z C - percentage of sequence identity: 99
1b3s A - percentage of sequence identity: 99
1b3s B - percentage of sequence identity: 99
1b3s C - percentage of sequence identity: 99
1ban A - percentage of sequence identity: 99
1ban B - percentage of sequence identity: 99
1ban C - percentage of sequence identity: 99
1bao A - percentage of sequence identity: 99
1bao B - percentage of sequence identity: 99
1bao C - percentage of sequence identity: 99
1bgs A - percentage of sequence identity: 100
1bgs B - percentage of sequence identity: 100
1bgs C - percentage of sequence identity: 100
1bne A - percentage of sequence identity: 98
1bne B - percentage of sequence identity: 98
1bne C - percentage of sequence identity: 98
1bnf A - percentage of sequence identity: 98
1bnf B - percentage of sequence identity: 98
1bnf C - percentage of sequence identity: 98
1bng A - percentage of sequence identity: 98
1bng B - percentage of sequence identity: 98
1bng C - percentage of sequence identity: 98
1bni A - percentage of sequence identity: 100
1bni B - percentage of sequence identity: 100
1bni C - percentage of sequence identity: 100
1bnj A - percentage of sequence identity: 100
1bnj B - percentage of sequence identity: 100
1bnj C - percentage of sequence identity: 100
1bnr - - percentage of sequence identity: 100
1bns A - percentage of sequence identity: 99
1bns B - percentage of sequence identity: 99
1bns C - percentage of sequence identity: 99
1brg A - percentage of sequence identity: 99
1brg B - percentage of sequence identity: 99
1brg C - percentage of sequence identity: 99
1brh A - percentage of sequence identity: 99
1brh B - percentage of sequence identity: 99
1brh C - percentage of sequence identity: 99
1bri A - percentage of sequence identity: 99
1bri B - percentage of sequence identity: 99
1bri C - percentage of sequence identity: 99
1brj A - percentage of sequence identity: 99
1brj B - percentage of sequence identity: 99
1brj C - percentage of sequence identity: 99
1brk A - percentage of sequence identity: 99
1brk B - percentage of sequence identity: 99
1brk C - percentage of sequence identity: 99
1brn L - percentage of sequence identity: 100
1brn M - percentage of sequence identity: 100
1brs A - percentage of sequence identity: 100
1brs B - percentage of sequence identity: 100
1brs C - percentage of sequence identity: 100
1bsa A - percentage of sequence identity: 99
1bsa B - percentage of sequence identity: 99
1bsa C - percentage of sequence identity: 99
1bsb A - percentage of sequence identity: 99
1bsb B - percentage of sequence identity: 99
1bsb C - percentage of sequence identity: 99
1bsc A - percentage of sequence identity: 99
1bsc B - percentage of sequence identity: 99
1bsc C - percentage of sequence identity: 99
1bsd A - percentage of sequence identity: 99
1bsd B - percentage of sequence identity: 99
1bsd C - percentage of sequence identity: 99
1bse A - percentage of sequence identity: 99
1bse B - percentage of sequence identity: 99
1bse C - percentage of sequence identity: 99
1buj A - percentage of sequence identity: 84
1fw7 A - percentage of sequence identity: 100
1gou A - percentage of sequence identity: 79
1gou B - percentage of sequence identity: 79
1gov A - percentage of sequence identity: 79
1gov B - percentage of sequence identity: 79
1goy A - percentage of sequence identity: 79
1goy B - percentage of sequence identity: 79
1rnb A - percentage of sequence identity: 98
1x1u A - percentage of sequence identity: 100
1x1u B - percentage of sequence identity: 100
1x1u C - percentage of sequence identity: 100
1x1w A - percentage of sequence identity: 100
1x1w B - percentage of sequence identity: 100
1x1w C - percentage of sequence identity: 100
1x1x A - percentage of sequence identity: 100
1x1x B - percentage of sequence identity: 100
1x1x C - percentage of sequence identity: 100
1x1y A - percentage of sequence identity: 99
1x1y B - percentage of sequence identity: 99
1x1y C - percentage of sequence identity: 99
1yvs - - percentage of sequence identity: 100
2c4b A - percentage of sequence identity: 99
2c4b B - percentage of sequence identity: 99
2rbi A - percentage of sequence identity: 83
2rbi B - percentage of sequence identity: 83