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Information on 1a41
PDB: 1a41
Compound: topoisomerase i
Classification: ISOMERASE
Entry date in PDB: 1999-06-01
Resolution [Å]: 2.30
R-Factor: 0.227


CHAIN: -
SWISS-PROT/TREMBL: P08585
   KEYWORD: 3D-structure    DNA-binding    Isomerase    Late protein    Topoisomerase   
EC: 5.99.1.2
SCOP: d.163.1.2 Alpha and beta proteins (a+b)    DNA breaking-rejoining enzymes    DNA breaking-rejoining enzymes    Eukaryotic DNA topoisomerase I, catalytic core    Eukaryotic DNA topoisomerase I, catalytic core    Vaccinia virus
GO:  DNA binding    DNA topoisomerase type I activity    DNA topological change    DNA unwinding   
1a41 Image
Image Source: PDB

Stored Loops of 1a41

Loops in ArchDB40 clusters

1a41_*_140 - HE => SUBCLASS : 5.14.1
1a41_*_153 - HA => SUBCLASS : 2.2.1
1a41_*_170 - AR => SUBCLASS : 2.5.3
1a41_*_269 - HH => SUBCLASS : 1.1.31
1a41_*_288 - HH => SUBCLASS : 2.1.2
1a41_*_248 - HH => SUBCLASS : 5.1.1

Loops in ArchDB95 clusters

1a41_*_170 - AR => SUBCLASS : 2.4.3
1a41_*_288 - HH => SUBCLASS : 2.1.3
1a41_*_288 - HH => SUBCLASS : 2.1.5
1a41_*_205 - HH => SUBCLASS : 3.4.1
1a41_*_248 - HH => SUBCLASS : 5.1.1
1a41_*_140 - HE => SUBCLASS : 5.19.1
1a41_*_153 - HA => SUBCLASS : 2.2.1

Loops in ArchDB-EC clusters

1a41_*_248 - HH => SUBCLASS : 5.1.1

Loops not clustered in ArchDB

1a41_*_170 - AR
1a41_*_159 - AR
1a41_*_159 - AR
1a41_*_175 - EH
1a41_*_164 - HA
1a41_*_153 - HA
1a41_*_164 - HA
1a41_*_183 - HH
1a41_*_219 - HH
1a41_*_115 - HH
1a41_*_82 - HH

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