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Information on 1a62
PDB: 1a62
Compound: rho
Classification: TRANSCRIPTION TERMINATION
Entry date in PDB: 1998-06-17
Resolution [Å]: 1.55
R-Factor: 0.216


CHAIN: -
SWISS-PROT/TREMBL: P03002
   KEYWORD: 3D-structure    ATP-binding    Complete proteome    Helicase    RNA-binding    Transcription termination   
SCOP: a.140.3.1 All alpha proteins    LEM/SAP HeH motif    Rho termination factor, N-terminal domain    Rho termination factor, N-terminal domain    Rho termination factor, N-terminal domain    Escherichia coli
SCOP: b.40.4.5 All beta proteins    OB-fold    Nucleic acid-binding proteins    Cold shock DNA-binding domain-like    Rho termination factor, RNA-binding domain    Escherichia coli
GO:  proton-transporting two-sector ATPase complex    proton-transporting two-sector ATPase complex    proton-transporting two-sector ATPase complex    proton-transporting two-sector ATPase complex    ATP binding    ATP binding    ATP binding    ATP binding    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    nucleic acid binding    nucleic acid binding    nucleic acid binding    nucleic acid binding    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    nucleotide binding    nucleotide binding    RNA binding    RNA binding    RNA binding    RNA binding    transcription termination factor activity    transcription termination factor activity    transcription termination factor activity    transcription termination factor activity    ATP synthesis coupled proton transport    ATP synthesis coupled proton transport    ATP synthesis coupled proton transport    ATP synthesis coupled proton transport    transcription termination    transcription termination    transcription termination    transcription termination   
1a62 Image
Image Source: PDB

Stored Loops of 1a62

Loops in ArchDB40 clusters

1a62_*_31 - HE => SUBCLASS : 1.1.1
1a62_*_31 - HE => SUBCLASS : 1.1.2
1a62_*_83 - HE => SUBCLASS : 5.29.1
1a62_*_79 - EH => SUBCLASS : 1.1.1
1a62_*_3 - HH => SUBCLASS : 2.7.2

Loops in ArchDB95 clusters

1a62_*_79 - EH => SUBCLASS : 1.1.13
1a62_*_3 - HH => SUBCLASS : 2.7.2
1a62_*_31 - HE => SUBCLASS : 1.1.1
1a62_*_31 - HE => SUBCLASS : 1.2.3
1a62_*_83 - HE => SUBCLASS : 5.31.1
1a62_*_83 - HE => SUBCLASS : 6.4.1
1a62_*_83 - HE => SUBCLASS : 6.34.1

Loops not clustered in ArchDB

1a62_*_49 - HA
1a62_*_63 - HA
1a62_*_96 - HA
1a62_*_11 - HH

Homologous structures to 1a62 classified in ArchDB

1a63 - - percentage of sequence identity: 100
1a8v A - percentage of sequence identity: 100
1a8v B - percentage of sequence identity: 100
1pv4 A - percentage of sequence identity: 100
1pv4 B - percentage of sequence identity: 100
1pv4 C - percentage of sequence identity: 100
1pv4 D - percentage of sequence identity: 100
1pv4 E - percentage of sequence identity: 100
1pv4 F - percentage of sequence identity: 100
1pvo A - percentage of sequence identity: 100
1pvo B - percentage of sequence identity: 100
1pvo C - percentage of sequence identity: 100
1pvo D - percentage of sequence identity: 100
1pvo E - percentage of sequence identity: 100
1pvo F - percentage of sequence identity: 100
1xpo A - percentage of sequence identity: 100
1xpo B - percentage of sequence identity: 100
1xpo C - percentage of sequence identity: 100
1xpo D - percentage of sequence identity: 100
1xpo E - percentage of sequence identity: 100
1xpo F - percentage of sequence identity: 100
1xpr A - percentage of sequence identity: 100
1xpr B - percentage of sequence identity: 100
1xpr C - percentage of sequence identity: 100
1xpr D - percentage of sequence identity: 100
1xpr E - percentage of sequence identity: 100
1xpr F - percentage of sequence identity: 100
1xpu A - percentage of sequence identity: 100
1xpu B - percentage of sequence identity: 100
1xpu C - percentage of sequence identity: 100
1xpu D - percentage of sequence identity: 100
1xpu E - percentage of sequence identity: 100
1xpu F - percentage of sequence identity: 100
2a8v A - percentage of sequence identity: 100
2a8v B - percentage of sequence identity: 100
2a8v C - percentage of sequence identity: 100