PDB: 1a8o Compound: hiv capsid Classification: CAPSID Entry date in PDB: 1998-10-14 Resolution [Å]: 1.70 R-Factor: 0.215

CHAIN: - SWISS-PROT/TREMBL: P12493    KEYWORD: 3D-structure    AIDS    Core protein    Lipoprotein    Myristate    Phosphorylation    Polyprotein    Repeat    Zinc-finger    SCOP: a.28.3.1 All alpha proteins    Acyl carrier protein-like    Retrovirus capsid protein C-terminal domain    Retrovirus capsid protein C-terminal domain    HIV capsid protein, dimerisation domain    Human immunodeficiency virus type 1 GO:  nucleic acid binding    structural molecule activity    viral life cycle

Image Source: PDB

Loops in ArchDB40 clusters

1a8o_*_189 - HH => SUBCLASS : 2.1.4
1a8o_*_189 - HH => SUBCLASS : 2.1.15
1a8o_*_161 - HH => SUBCLASS : 3.2.9

Loops in ArchDB95 clusters

1a8o_*_189 - HH => SUBCLASS : 2.1.18
1a8o_*_161 - HH => SUBCLASS : 3.1.2

Loops not clustered in ArchDB

1a8o_*_179 - HH

1a43 - - percentage of sequence identity: 98
1aum - - percentage of sequence identity: 98
1baj - - percentage of sequence identity: 98
1bmx - - percentage of sequence identity: 96
1e6j P - percentage of sequence identity: 97
2buo A - percentage of sequence identity: 98