Information on 1a9n |
PDB: 1a9n Compound: u2 RNA hairpin iv Classification: COMPLEX (NUCLEAR PROTEIN/RNA) Entry date in PDB: 1998-09-23 Resolution [Å]: 2.38 R-Factor: 0.282 |
CHAIN: A SWISS-PROT/TREMBL:
P09661
KEYWORD: 3D-structure Leucine-rich repeat Nuclear protein Repeat Ribonucleoprotein RNA-binding SCOP: c.10.2.4 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like U2A'-like Splicesomal U2A' protein Human (Homo sapiens) GO: CHAIN: B SWISS-PROT/TREMBL:
P08579
KEYWORD: 3D-structure mRNA processing mRNA splicing Nuclear protein Repeat Ribonucleoprotein RNA-binding Systemic lupus erythematosus SCOP: d.58.7.1 Alpha and beta proteins (a+b) Ferredoxin-like RNA-binding domain, RBD Canonical RBD Splicing factor U2B'' Human (Homo sapiens) GO: nucleic acid binding nucleotide binding CHAIN: C SWISS-PROT/TREMBL:
P09661
KEYWORD: 3D-structure Leucine-rich repeat Nuclear protein Repeat Ribonucleoprotein RNA-binding SCOP: c.10.2.4 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like U2A'-like Splicesomal U2A' protein Human (Homo sapiens) GO: CHAIN: D SWISS-PROT/TREMBL:
P08579
KEYWORD: 3D-structure mRNA processing mRNA splicing Nuclear protein Repeat Ribonucleoprotein RNA-binding Systemic lupus erythematosus SCOP: d.58.7.1 Alpha and beta proteins (a+b) Ferredoxin-like RNA-binding domain, RBD Canonical RBD Splicing factor U2B'' Human (Homo sapiens) GO: nucleic acid binding nucleotide binding |
Image Source: PDB |
Stored Loops of 1a9n |
Loops in ArchDB40 clusters
1a9n_A_144 - HA => SUBCLASS : 2.1.1
1a9n_A_14 - HA => SUBCLASS : 3.1.1
1a9n_A_148 - EH => SUBCLASS : 1.1.4
1a9n_A_46 - AR => SUBCLASS : 7.2.1
1a9n_A_68 - AR => SUBCLASS : 7.2.1
Loops in ArchDB95 clusters
1a9n_A_78 - EH => SUBCLASS : 0.1.44
1a9n_B_55 - EH => SUBCLASS : 2.1.1
1a9n_A_148 - EH => SUBCLASS : 2.2.1
1a9n_B_11 - EH => SUBCLASS : 7.5.1
1a9n_A_46 - AR => SUBCLASS : 7.14.1
1a9n_A_68 - AR => SUBCLASS : 7.14.1
1a9n_A_6 - HE => SUBCLASS : 2.7.1
1a9n_B_23 - HE => SUBCLASS : 2.8.4
1a9n_A_131 - HE => SUBCLASS : 5.9.1
1a9n_A_144 - HA => SUBCLASS : 2.1.1
1a9n_A_14 - HA => SUBCLASS : 3.1.1
Loops not clustered in ArchDB
1a9n_A_56 - AR
1a9n_B_80 - AR
1a9n_B_83 - EH
1a9n_A_117 - EH
1a9n_A_22 - HA
1a9n_B_76 - HA
1a9n_B_40 - HA
1a9n_A_92 - HA
1a9n_A_83 - HE
1a9n_B_62 - HE
Homologous structures to 1a9n classified in ArchDB |
1a9n A - percentage of sequence identity: 100
1a9n C - percentage of sequence identity: 100
1nu4 A - percentage of sequence identity: 72
1oia A - percentage of sequence identity: 74