PDB: 1b7g Compound: glyceraldehyde 3-phosphate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 1999-10-08 Resolution [Å]: 2.05 R-Factor: 0.226

CHAIN: O SWISS-PROT/TREMBL: P39460    KEYWORD: 3D-structure    Complete proteome    Glycolysis    NAD    NADP    Oxidoreductase    EC: 1.2.1.59 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Archaeon Sulfolobus solfataricus SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Archaeon Sulfolobus solfataricus SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Archaeon Sulfolobus solfataricus GO:  cytoplasm    glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    NADP binding    glycolysis    CHAIN: Q SWISS-PROT/TREMBL: P39460    KEYWORD: 3D-structure    Complete proteome    Glycolysis    NAD    NADP    Oxidoreductase    EC: 1.2.1.59 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Archaeon Sulfolobus solfataricus SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Archaeon Sulfolobus solfataricus SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Archaeon Sulfolobus solfataricus GO:  cytoplasm    glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    NADP binding    glycolysis

Image Source: PDB

Loops in ArchDB40 clusters

1b7g_O_89 - HE => SUBCLASS : 1.1.1
1b7g_O_38 - HE => SUBCLASS : 1.1.2
1b7g_O_38 - HE => SUBCLASS : 2.1.1
1b7g_O_71 - HE => SUBCLASS : 2.5.1
1b7g_O_38 - HE => SUBCLASS : 3.2.2
1b7g_O_11 - HE => SUBCLASS : 3.3.1
1b7g_O_11 - HE => SUBCLASS : 3.4.1
1b7g_O_233 - HE => SUBCLASS : 3.13.1
1b7g_O_121 - HE => SUBCLASS : 4.13.1
1b7g_O_133 - EH => SUBCLASS : 1.1.4
1b7g_O_50 - EH => SUBCLASS : 1.1.10
1b7g_O_50 - EH => SUBCLASS : 1.1.16
1b7g_O_2 - EH => SUBCLASS : 3.23.1
1b7g_O_219 - EH => SUBCLASS : 5.12.1
1b7g_O_278 - AR => SUBCLASS : 3.4.2
1b7g_O_205 - AR => SUBCLASS : 5.16.1
1b7g_O_304 - HH => SUBCLASS : 4.1.1
1b7g_O_304 - HH => SUBCLASS : 4.1.5

Loops in ArchDB95 clusters

1b7g_O_118 - EH => SUBCLASS : 0.1.28
1b7g_O_50 - EH => SUBCLASS : 1.1.10
1b7g_O_133 - EH => SUBCLASS : 2.2.1
1b7g_O_2 - EH => SUBCLASS : 3.37.1
1b7g_O_219 - EH => SUBCLASS : 5.10.1
1b7g_O_278 - AR => SUBCLASS : 3.2.3
1b7g_O_205 - AR => SUBCLASS : 5.16.1
1b7g_O_304 - HH => SUBCLASS : 4.1.1
1b7g_O_89 - HE => SUBCLASS : 1.1.1
1b7g_O_38 - HE => SUBCLASS : 1.2.3
1b7g_O_38 - HE => SUBCLASS : 2.1.3
1b7g_O_71 - HE => SUBCLASS : 2.2.1
1b7g_O_71 - HE => SUBCLASS : 2.3.5
1b7g_O_11 - HE => SUBCLASS : 3.6.1
1b7g_O_11 - HE => SUBCLASS : 3.6.2
1b7g_O_233 - HE => SUBCLASS : 3.10.4

Loops in ArchDB-EC clusters

1b7g_O_304 - HH => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1b7g_O_157 - AR
1b7g_O_103 - AR
1b7g_O_103 - AR
1b7g_O_157 - AR
1b7g_O_205 - AR
1b7g_O_278 - AR
1b7g_O_291 - EH
1b7g_O_246 - EH
1b7g_O_183 - EH
1b7g_O_80 - EH
1b7g_O_26 - EH
1b7g_O_286 - HA
1b7g_O_286 - HA
1b7g_O_258 - HE
1b7g_O_193 - HE
1b7g_O_139 - HE
1b7g_O_57 - HH

1b7g O - percentage of sequence identity: 100
1b7g Q - percentage of sequence identity: 100