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Information on 1bfs
PDB: 1bfs
Compound: nuclear factor nf-kappa-b p50
Classification: TRANSCRIPTION FACTOR
Entry date in PDB: 1998-01-28
Resolution [Å]: 2.20
R-Factor: 0.183


CHAIN: -
SWISS-PROT/TREMBL: P25799
   KEYWORD: 3D-structure    Activator    Alternative splicing    ANK repeat    Apoptosis    DNA-binding    Nuclear protein    Phosphorylation    Repeat    Transcription regulation   
SCOP: b.1.18.1 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain    p50 subunit of NF-kappa B transcription factor    Mouse (Mus musculus)
GO:  nucleus    protein binding    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent    signal transduction   
1bfs Image
Image Source: PDB

Stored Loops of 1bfs

Loops in ArchDB95 clusters

1bfs_*_250 - AR => SUBCLASS : 3.4.2
1bfs_*_257 - AR => SUBCLASS : 5.72.1
1bfs_*_265 - AR => SUBCLASS : 7.38.1
1bfs_*_308 - AR => SUBCLASS : 12.8.1
1bfs_*_325 - HA => SUBCLASS : 10.8.1

Loops not clustered in ArchDB

1bfs_*_291 - AR
1bfs_*_279 - HA

Homologous structures to 1bfs classified in ArchDB

1a3q B - percentage of sequence identity: 64
1ikn C - percentage of sequence identity: 100
1le5 B - percentage of sequence identity: 100
1le5 F - percentage of sequence identity: 100
1le9 B - percentage of sequence identity: 100
1le9 F - percentage of sequence identity: 100
1lei B - percentage of sequence identity: 100
1nfi B - percentage of sequence identity: 99
1nfi D - percentage of sequence identity: 99
1nfk A - percentage of sequence identity: 100
1nfk B - percentage of sequence identity: 100
1ooa B - percentage of sequence identity: 100
1svc P - percentage of sequence identity: 99
1u36 A - percentage of sequence identity: 98
1u3j A - percentage of sequence identity: 99
1u3y A - percentage of sequence identity: 98
1u3z A - percentage of sequence identity: 98
1u41 A - percentage of sequence identity: 99
1u41 B - percentage of sequence identity: 99
1u41 C - percentage of sequence identity: 99
1u41 D - percentage of sequence identity: 99
1u42 A - percentage of sequence identity: 98
1vkx B - percentage of sequence identity: 100