Information on 1bfs |
PDB: 1bfs Compound: nuclear factor nf-kappa-b p50 Classification: TRANSCRIPTION FACTOR Entry date in PDB: 1998-01-28 Resolution [Å]: 2.20 R-Factor: 0.183 |
CHAIN: - SWISS-PROT/TREMBL:
P25799
KEYWORD: 3D-structure Activator Alternative splicing ANK repeat Apoptosis DNA-binding Nuclear protein Phosphorylation Repeat Transcription regulation SCOP: b.1.18.1 All beta proteins Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain p50 subunit of NF-kappa B transcription factor Mouse (Mus musculus) GO: nucleus protein binding transcription factor activity regulation of transcription regulation of transcription, DNA-dependent signal transduction |
Image Source: PDB |
Stored Loops of 1bfs |
Loops in ArchDB95 clusters
1bfs_*_250 - AR => SUBCLASS : 3.4.2
1bfs_*_257 - AR => SUBCLASS : 5.72.1
1bfs_*_265 - AR => SUBCLASS : 7.38.1
1bfs_*_308 - AR => SUBCLASS : 12.8.1
1bfs_*_325 - HA => SUBCLASS : 10.8.1
Loops not clustered in ArchDB
1bfs_*_291 - AR
1bfs_*_279 - HA
Homologous structures to 1bfs classified in ArchDB |
1a3q B - percentage of sequence identity: 64
1ikn C - percentage of sequence identity: 100
1le5 B - percentage of sequence identity: 100
1le5 F - percentage of sequence identity: 100
1le9 B - percentage of sequence identity: 100
1le9 F - percentage of sequence identity: 100
1lei B - percentage of sequence identity: 100
1nfi B - percentage of sequence identity: 99
1nfi D - percentage of sequence identity: 99
1nfk A - percentage of sequence identity: 100
1nfk B - percentage of sequence identity: 100
1ooa B - percentage of sequence identity: 100
1svc P - percentage of sequence identity: 99
1u36 A - percentage of sequence identity: 98
1u3j A - percentage of sequence identity: 99
1u3y A - percentage of sequence identity: 98
1u3z A - percentage of sequence identity: 98
1u41 A - percentage of sequence identity: 99
1u41 B - percentage of sequence identity: 99
1u41 C - percentage of sequence identity: 99
1u41 D - percentage of sequence identity: 99
1u42 A - percentage of sequence identity: 98
1vkx B - percentage of sequence identity: 100