PDB: 1bqu Compound: gp130 Classification: SIGNALING PROTEIN Entry date in PDB: 1998-08-26 Resolution [Å]: 2.00 R-Factor: 0.221

CHAIN: A SWISS-PROT/TREMBL: P40189    KEYWORD: 3D-structure    Alternative splicing    Glycoprotein    Immunoglobulin domain    Receptor    Repeat    Signal    Transmembrane    SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Cytokine receptor gp130 cytokine-binding domains    Human (Homo sapiens) SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Cytokine receptor gp130 cytokine-binding domains    Human (Homo sapiens) GO:  membrane    hematopoietin/interferon-class (D200-domain) cytokine receptor activity    CHAIN: B SWISS-PROT/TREMBL: P40189    KEYWORD: 3D-structure    Alternative splicing    Glycoprotein    Immunoglobulin domain    Receptor    Repeat    Signal    Transmembrane    SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Cytokine receptor gp130 cytokine-binding domains    Human (Homo sapiens) SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Cytokine receptor gp130 cytokine-binding domains    Human (Homo sapiens) GO:  membrane    hematopoietin/interferon-class (D200-domain) cytokine receptor activity

Image Source: PDB

Loops in ArchDB40 clusters

1bqu_A_39 - HA => SUBCLASS : 2.2.1
1bqu_A_12 - HA => SUBCLASS : 5.18.1
1bqu_A_137 - HA => SUBCLASS : 6.8.1
1bqu_A_199 - EH => SUBCLASS : 3.3.3
1bqu_A_199 - EH => SUBCLASS : 3.3.5
1bqu_A_94 - AR => SUBCLASS : 5.45.1
1bqu_A_63 - AR => SUBCLASS : 8.3.1

Loops in ArchDB95 clusters

1bqu_A_199 - EH => SUBCLASS : 3.1.3
1bqu_A_199 - EH => SUBCLASS : 3.1.11
1bqu_A_94 - AR => SUBCLASS : 4.11.4
1bqu_A_165 - AR => SUBCLASS : 5.9.1
1bqu_A_63 - AR => SUBCLASS : 8.7.2
1bqu_A_39 - HA => SUBCLASS : 2.2.1
1bqu_A_12 - HA => SUBCLASS : 5.18.1
1bqu_A_137 - HA => SUBCLASS : 6.9.1

Loops not clustered in ArchDB

1bqu_A_25 - AR
1bqu_A_152 - AR
1bqu_A_122 - AR
1bqu_A_102 - AR
1bqu_A_87 - AR
1bqu_A_54 - AR
1bqu_A_49 - AR
1bqu_A_76 - HA
1bqu_A_108 - HA
1bqu_A_175 - HA

1bj8 - - percentage of sequence identity: 100
1bqu A - percentage of sequence identity: 100
1bqu B - percentage of sequence identity: 100
1i1r A - percentage of sequence identity: 100
1p9m A - percentage of sequence identity: 100
1pvh A - percentage of sequence identity: 100
1pvh C - percentage of sequence identity: 100