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PDB code:
Information on 1c1a
PDB:
1c1a
Compound:
rsv integrase
Classification:
VIRUS/VIRAL PROTEIN
Entry date in PDB:
2000-03-01
Resolution [Å]:
3.10
R-Factor:
0.256
CHAIN:
A
SWISS-PROT/TREMBL:
P03354
KEYWORD:
3D-structure Endonuclease Hydrolase Metal-binding Nuclease Polyprotein RNA-directed DNA polymerase Transferase Zinc Zinc-finger
EC:
2.7.7.49
SCOP:
b.34.7.1
All beta proteins
SH3-like barrel
DNA-binding domain of retroviral integrase
DNA-binding domain of retroviral integrase
DNA-binding domain of retroviral integrase
Rous sarcoma virus (RSV, avian sarcoma virus)
SCOP:
c.55.3.2
Alpha and beta proteins (a/b)
Ribonuclease H-like motif
Ribonuclease H-like
Retroviral integrase, catalytic domain
Retroviral integrase, catalytic domain
Rous sarcoma virus (RSV, avian sarcoma virus)
GO:
DNA binding
integrase activity
nucleic acid binding
ribonuclease H activity
RNA binding
RNA-directed DNA polymerase activity
zinc ion binding
DNA integration
DNA recombination
RNA-dependent DNA replication
CHAIN:
B
SWISS-PROT/TREMBL:
P03354
KEYWORD:
3D-structure Endonuclease Hydrolase Metal-binding Nuclease Polyprotein RNA-directed DNA polymerase Transferase Zinc Zinc-finger
EC:
2.7.7.49
SCOP:
b.34.7.1
All beta proteins
SH3-like barrel
DNA-binding domain of retroviral integrase
DNA-binding domain of retroviral integrase
DNA-binding domain of retroviral integrase
Rous sarcoma virus (RSV, avian sarcoma virus)
SCOP:
c.55.3.2
Alpha and beta proteins (a/b)
Ribonuclease H-like motif
Ribonuclease H-like
Retroviral integrase, catalytic domain
Retroviral integrase, catalytic domain
Rous sarcoma virus (RSV, avian sarcoma virus)
GO:
DNA binding
integrase activity
nucleic acid binding
ribonuclease H activity
RNA binding
RNA-directed DNA polymerase activity
zinc ion binding
DNA integration
DNA recombination
RNA-dependent DNA replication
Image Source:
PDB
Homologous structures to 1c1a classified in ArchDB
1cxq
A - percentage of sequence identity: 98