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Information on 1c3d
PDB: 1c3d
Compound: c3d
Classification: COMPLEMENT
Entry date in PDB: 1998-10-07
Resolution [Å]: 1.80
R-Factor: 0.188


CHAIN: -
SWISS-PROT/TREMBL: P01024
   KEYWORD: 3D-structure    Complement alternate pathway    Complement pathway    Disease mutation    Glycoprotein    Inflammatory response    Plasma    Polymorphism    Signal    Thioester bond   
SCOP: a.102.4.4 All alpha proteins    alpha/alpha toroid    Terpenoid cyclases/Protein prenyltransferases    Complement components    C3D, a C3 fragment and ligand for complement receptor 2    Human (Homo sapiens)
GO:  extracellular region    endopeptidase inhibitor activity    complement activation    inflammatory response   


CHAIN: C
SWISS-PROT/TREMBL: P01024
   KEYWORD: 3D-structure    Complement alternate pathway    Complement pathway    Disease mutation    Glycoprotein    Inflammatory response    Plasma    Polymorphism    Signal    Thioester bond   
GO:  
1c3d Image
Image Source: PDB

Stored Loops of 1c3d

Loops in ArchDB40 clusters

1c3d_*_233 - HH => SUBCLASS : 2.4.4
1c3d_*_172 - HH => SUBCLASS : 3.4.1

Loops in ArchDB95 clusters

1c3d_*_233 - HH => SUBCLASS : 2.2.12
1c3d_*_172 - HH => SUBCLASS : 3.3.4
1c3d_*_49 - HH => SUBCLASS : 16.5.1

Loops not clustered in ArchDB

1c3d_*_20 - HH
1c3d_*_83 - HH
1c3d_*_104 - HH
1c3d_*_146 - HH
1c3d_*_162 - HH
1c3d_*_193 - HH
1c3d_*_211 - HH
1c3d_*_256 - HH

Homologous structures to 1c3d classified in ArchDB

1ghq A - percentage of sequence identity: 100
1qsj A - percentage of sequence identity: 84
1qsj B - percentage of sequence identity: 84
1qsj C - percentage of sequence identity: 84
1qsj D - percentage of sequence identity: 84
1w2s A - percentage of sequence identity: 100
2a73 B - percentage of sequence identity: 99