PDB: 1c9b Compound: general transcription factor iib Classification: TRANSCRIPTION/DNA Entry date in PDB: 2000-01-10 Resolution [Å]: 2.65 R-Factor: 0.229

CHAIN: A SWISS-PROT/TREMBL: Q00403    KEYWORD: 3D-structure    Metal-binding    Nuclear protein    Polymorphism    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) GO:  transcription factor complex    transcription factor activity    zinc ion binding    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: B SWISS-PROT/TREMBL: P20226    KEYWORD: 3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: E SWISS-PROT/TREMBL: Q00403    KEYWORD: 3D-structure    Metal-binding    Nuclear protein    Polymorphism    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) GO:  transcription factor complex    transcription factor activity    zinc ion binding    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: F SWISS-PROT/TREMBL: P20226    KEYWORD: 3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: I SWISS-PROT/TREMBL: Q00403    KEYWORD: 3D-structure    Metal-binding    Nuclear protein    Polymorphism    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) GO:  transcription factor complex    transcription factor activity    zinc ion binding    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: J SWISS-PROT/TREMBL: P20226    KEYWORD: 3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: M SWISS-PROT/TREMBL: Q00403    KEYWORD: 3D-structure    Metal-binding    Nuclear protein    Polymorphism    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) GO:  transcription factor complex    transcription factor activity    zinc ion binding    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: N SWISS-PROT/TREMBL: P20226    KEYWORD: 3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: Q SWISS-PROT/TREMBL: Q00403    KEYWORD: 3D-structure    Metal-binding    Nuclear protein    Polymorphism    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) SCOP: a.74.1.2 All alpha proteins    Cyclin-like    Cyclin-like    Transcription factor IIB (TFIIB), core domain    Transcription factor IIB (TFIIB), core domain    Human (Homo sapiens) GO:  transcription factor complex    transcription factor activity    zinc ion binding    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: R SWISS-PROT/TREMBL: P20226    KEYWORD: 3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    3D-structure    Disease mutation    DNA-binding    Nuclear protein    Polymorphism    Repeat    Transcription    Triplet repeat expansion    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Human (Homo sapiens) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter

Image Source: PDB

1cdw A - percentage of sequence identity: 99
1nh2 A - percentage of sequence identity: 81
1qna A - percentage of sequence identity: 83
null nu - percentage of sequence identity: 0