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Information on 1cc1
PDB: 1cc1
Compound: hydrogenase (small subunit)
Classification: OXIDOREDUCTASE
Entry date in PDB: 1999-06-01
Resolution [Å]: 2.15
R-Factor: 0.194


CHAIN: L
SWISS-PROT/TREMBL: P13065
   KEYWORD: 3D-structure    Iron    Metal-binding    Nickel    Oxidoreductase    Periplasmic    Selenium    Selenocysteine   
EC: 1.12.99.6
SCOP: e.18.1.1 Multi-domain proteins (alpha and beta)    Nickel-iron hydrogenase, large subunit    Nickel-iron hydrogenase, large subunit    Nickel-iron hydrogenase, large subunit    Nickel-iron hydrogenase, large subunit    Desulfomicrobium baculatum
GO:  ferredoxin hydrogenase activity    nickel ion binding    electron transport   


CHAIN: S
SWISS-PROT/TREMBL: P13063
   KEYWORD: 3D-structure    4Fe-4S    Iron-sulfur    Oxidoreductase    Periplasmic    Signal   
EC: 1.12.99.6
SCOP: e.19.1.1 Multi-domain proteins (alpha and beta)    Nickel-iron hydrogenase, small subunit    Nickel-iron hydrogenase, small subunit    Nickel-iron hydrogenase, small subunit    Nickel-iron hydrogenase, small subunit    Desulfomicrobium baculatum
GO:  ferredoxin hydrogenase complex    ferredoxin hydrogenase activity    iron ion binding    NADH dehydrogenase (ubiquinone) activity    electron transport    mitochondrial electron transport, NADH to ubiquinone   
1cc1 Image
Image Source: PDB

Stored Loops of 1cc1

Loops in ArchDB40 clusters

1cc1_L_426 - HA => SUBCLASS : 2.4.3
1cc1_L_144 - HH => SUBCLASS : 3.4.7
1cc1_L_74 - HH => SUBCLASS : 5.1.3
1cc1_L_334 - HH => SUBCLASS : 5.3.2

Loops in ArchDB95 clusters

1cc1_S_142 - EH => SUBCLASS : 1.1.1
1cc1_S_119 - EH => SUBCLASS : 1.3.1
1cc1_S_8 - EH => SUBCLASS : 5.56.1
1cc1_S_158 - EH => SUBCLASS : 6.68.1
1cc1_S_80 - AR => SUBCLASS : 7.34.1
1cc1_L_144 - HH => SUBCLASS : 3.6.2
1cc1_L_74 - HH => SUBCLASS : 5.1.2
1cc1_L_463 - HH => SUBCLASS : 11.9.1
1cc1_L_426 - HA => SUBCLASS : 2.1.7
1cc1_L_253 - HA => SUBCLASS : 6.12.2
1cc1_L_13 - HA => SUBCLASS : 7.21.1

Loops in ArchDB-EC clusters

1cc1_L_74 - HH => SUBCLASS : 5.3.1

Loops not clustered in ArchDB

1cc1_L_248 - AR
1cc1_L_263 - AR
1cc1_L_274 - AR
1cc1_L_300 - AR
1cc1_S_73 - AR
1cc1_L_248 - AR
1cc1_L_263 - AR
1cc1_L_274 - AR
1cc1_L_300 - AR
1cc1_S_73 - AR
1cc1_S_80 - AR
1cc1_L_36 - EH
1cc1_S_41 - EH
1cc1_S_104 - EH
1cc1_L_438 - EH
1cc1_L_322 - EH
1cc1_L_196 - EH
1cc1_L_268 - HA
1cc1_L_415 - HA
1cc1_S_90 - HA
1cc1_L_13 - HA
1cc1_L_26 - HA
1cc1_L_192 - HA
1cc1_L_253 - HA
1cc1_S_90 - HA
1cc1_L_268 - HA
1cc1_L_415 - HA
1cc1_L_426 - HA
1cc1_L_192 - HA
1cc1_L_283 - HA
1cc1_L_283 - HA
1cc1_L_26 - HA
1cc1_S_106 - HE
1cc1_L_224 - HE
1cc1_L_374 - HE
1cc1_S_33 - HE
1cc1_S_54 - HE
1cc1_L_151 - HE
1cc1_S_125 - HE
1cc1_S_145 - HE
1cc1_S_214 - HH
1cc1_L_50 - HH
1cc1_L_62 - HH
1cc1_L_480 - HH
1cc1_S_200 - HH
1cc1_S_168 - HH
1cc1_S_20 - HH
1cc1_S_246 - HH
1cc1_L_448 - HH
1cc1_L_347 - HH
1cc1_L_203 - HH
1cc1_L_95 - HH

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