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Information on 1cdy
PDB: 1cdy
Compound: t-cell surface glycoprotein cd4
Classification: T-CELL SURFACE GLYCOPROTEIN
Entry date in PDB: 1997-04-01
Resolution [Å]: 2.00
R-Factor: 0.202


CHAIN: -
SWISS-PROT/TREMBL: P01730
   KEYWORD: 3D-structure    Glycoprotein    Immune response    Immunoglobulin domain    Lipoprotein    Palmitate    Polymorphism    Repeat    Signal    T-cell    Transmembrane   
SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    CD4 V-set domains    Human (Homo sapiens)
SCOP: b.1.1.3 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C2 set domains    CD4 C2-set domains    Human (Homo sapiens)
GO:  integral to membrane    membrane    cell adhesion    immune response   
1cdy Image
Image Source: PDB

Stored Loops of 1cdy

Loops in ArchDB40 clusters

1cdy_*_155 - HA => SUBCLASS : 2.1.1
1cdy_*_35 - HA => SUBCLASS : 2.3.2
1cdy_*_2 - AR => SUBCLASS : 3.3.2
1cdy_*_2 - AR => SUBCLASS : 4.1.1
1cdy_*_107 - AR => SUBCLASS : 4.1.1
1cdy_*_69 - AR => SUBCLASS : 7.1.1
1cdy_*_143 - AR => SUBCLASS : 8.1.4

Loops in ArchDB95 clusters

1cdy_*_2 - AR => SUBCLASS : 1.1.2
1cdy_*_107 - AR => SUBCLASS : 3.5.1
1cdy_*_2 - AR => SUBCLASS : 4.1.1
1cdy_*_107 - AR => SUBCLASS : 4.1.1
1cdy_*_69 - AR => SUBCLASS : 7.1.1
1cdy_*_143 - AR => SUBCLASS : 8.2.1
1cdy_*_155 - HA => SUBCLASS : 2.1.3
1cdy_*_35 - HA => SUBCLASS : 2.3.2

Loops not clustered in ArchDB

1cdy_*_12 - AR
1cdy_*_43 - AR
1cdy_*_89 - AR
1cdy_*_26 - HA
1cdy_*_55 - HA
1cdy_*_80 - HA
1cdy_*_114 - HA

Homologous structures to 1cdy classified in ArchDB

1cdh - - percentage of sequence identity: 99
1cdi - - percentage of sequence identity: 99
1cdj - - percentage of sequence identity: 99
1cdu - - percentage of sequence identity: 98
1g9m C - percentage of sequence identity: 99
1g9n C - percentage of sequence identity: 99
1gc1 C - percentage of sequence identity: 99
1jl4 D - percentage of sequence identity: 99
1rzj C - percentage of sequence identity: 99
1rzk C - percentage of sequence identity: 99
1wio A - percentage of sequence identity: 99
1wio B - percentage of sequence identity: 99
1wip A - percentage of sequence identity: 99
1wip B - percentage of sequence identity: 99
1wiq A - percentage of sequence identity: 99
1wiq B - percentage of sequence identity: 99
2b4c C - percentage of sequence identity: 99
3cd4 - - percentage of sequence identity: 99