PDB: 1cip Compound: guanine nucleotide-binding protein alpha-1 subunit Classification: HYDROLASE Entry date in PDB: 1999-04-09 Resolution [Å]: 1.50 R-Factor: 0.213

CHAIN: A SWISS-PROT/TREMBL: P10824    KEYWORD: 3D-structure    ADP-ribosylation    GTP-binding    Lipoprotein    Multigene family    Myristate    Palmitate    Transducer    SCOP: a.66.1.1 All alpha proteins    Transducin (alpha subunit), insertion domain    Transducin (alpha subunit), insertion domain    Transducin (alpha subunit), insertion domain    Transducin (alpha subunit), insertion domain    Rat (Rattus norvegicus) SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Transducin (alpha subunit)    Rat (Rattus norvegicus) SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Transducin (alpha subunit)    Rat (Rattus norvegicus) GO:  GTP binding    signal transducer activity    G-protein coupled receptor protein signaling pathway    signal transduction

Image Source: PDB

Loops in ArchDB40 clusters

1cip_A_242 - HE => SUBCLASS : 7.2.1
1cip_A_184 - HA => SUBCLASS : 2.1.1
1cip_A_233 - HA => SUBCLASS : 2.2.25
1cip_A_263 - EH => SUBCLASS : 1.4.1
1cip_A_319 - EH => SUBCLASS : 4.1.1
1cip_A_33 - EH => SUBCLASS : 6.1.1
1cip_A_121 - HH => SUBCLASS : 1.1.1
1cip_A_121 - HH => SUBCLASS : 1.1.2

Loops in ArchDB95 clusters

1cip_A_263 - EH => SUBCLASS : 1.4.2
1cip_A_319 - EH => SUBCLASS : 4.1.1
1cip_A_33 - EH => SUBCLASS : 6.1.1
1cip_A_194 - AR => SUBCLASS : 18.1.1
1cip_A_121 - HH => SUBCLASS : 1.1.2
1cip_A_134 - HH => SUBCLASS : 4.17.2
1cip_A_242 - HE => SUBCLASS : 7.2.1
1cip_A_184 - HA => SUBCLASS : 2.1.1
1cip_A_233 - HA => SUBCLASS : 2.2.24
1cip_A_233 - HA => SUBCLASS : 2.2.43

Loops not clustered in ArchDB

1cip_A_220 - AR
1cip_A_237 - EH
1cip_A_171 - HE
1cip_A_296 - HE
1cip_A_159 - HH
1cip_A_152 - HH
1cip_A_100 - HH
1cip_A_70 - HH
1cip_A_63 - HH
1cip_A_46 - HH
1cip_A_271 - HH

1agr A - percentage of sequence identity: 100
1agr D - percentage of sequence identity: 100
1as0 - - percentage of sequence identity: 99
1as2 - - percentage of sequence identity: 99
1as3 - - percentage of sequence identity: 99
1bh2 - - percentage of sequence identity: 99
1bof - - percentage of sequence identity: 100
1fqj A - percentage of sequence identity: 78
1fqj D - percentage of sequence identity: 78
1fqk A - percentage of sequence identity: 78
1fqk C - percentage of sequence identity: 78
1gdd - - percentage of sequence identity: 100
1gfi - - percentage of sequence identity: 100
1gg2 A - percentage of sequence identity: 99
1gia - - percentage of sequence identity: 100
1gil - - percentage of sequence identity: 99
1git - - percentage of sequence identity: 99
1got A - percentage of sequence identity: 75
1gp2 A - percentage of sequence identity: 100
1kjy A - percentage of sequence identity: 99
1kjy C - percentage of sequence identity: 99
1shz A - percentage of sequence identity: 70
1shz D - percentage of sequence identity: 70
1svk A - percentage of sequence identity: 99
1svs A - percentage of sequence identity: 99
1tad B - percentage of sequence identity: 70
1tad C - percentage of sequence identity: 70
1tag - - percentage of sequence identity: 70
1tnd A - percentage of sequence identity: 70
1tnd B - percentage of sequence identity: 70
1tnd C - percentage of sequence identity: 70
1y3a A - percentage of sequence identity: 99
1y3a B - percentage of sequence identity: 99
1y3a C - percentage of sequence identity: 99
1y3a D - percentage of sequence identity: 99