PDB: 1czf Compound: polygalacturonase ii Classification: HYDROLASE Entry date in PDB: 1999-10-28 Resolution [Å]: 1.68 R-Factor: 0.166

CHAIN: A SWISS-PROT/TREMBL: P26214    KEYWORD: 3D-structure    Cell wall    Glycoprotein    Glycosidase    Hydrolase    Multigene family    Repeat    Signal    Zymogen    EC: 3.2.1.15 SCOP: b.80.1.3 All beta proteins    Single-stranded right-handed beta-helix    Pectin lyase-like    Galacturonase    Polygalacturonase    Fungus (Aspergillus niger), endo-polygalacturonase II GO:  polygalacturonase activity    carbohydrate metabolism    CHAIN: B SWISS-PROT/TREMBL: P26214    KEYWORD: 3D-structure    Cell wall    Glycoprotein    Glycosidase    Hydrolase    Multigene family    Repeat    Signal    Zymogen    EC: 3.2.1.15 SCOP: b.80.1.3 All beta proteins    Single-stranded right-handed beta-helix    Pectin lyase-like    Galacturonase    Polygalacturonase    Fungus (Aspergillus niger), endo-polygalacturonase II GO:  polygalacturonase activity    carbohydrate metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1czf_A_29 - EH => SUBCLASS : 2.1.1
1czf_A_188 - AR => SUBCLASS : 1.1.3
1czf_A_47 - AR => SUBCLASS : 1.1.3
1czf_A_209 - AR => SUBCLASS : 1.1.3
1czf_A_137 - AR => SUBCLASS : 1.1.3
1czf_A_159 - AR => SUBCLASS : 1.1.3
1czf_A_90 - AR => SUBCLASS : 1.1.4
1czf_A_182 - AR => SUBCLASS : 1.1.8
1czf_A_204 - AR => SUBCLASS : 1.2.27
1czf_A_71 - AR => SUBCLASS : 1.3.2
1czf_A_90 - AR => SUBCLASS : 2.5.1
1czf_A_54 - AR => SUBCLASS : 3.3.3
1czf_A_98 - AR => SUBCLASS : 4.2.4
1czf_A_218 - AR => SUBCLASS : 4.48.1
1czf_A_323 - AR => SUBCLASS : 5.62.1
1czf_A_61 - AR => SUBCLASS : 6.23.1
1czf_A_237 - HA => SUBCLASS : 2.4.1

Loops in ArchDB-EC clusters

1czf_A_35 - HE => SUBCLASS : 2.4.3

Loops not clustered in ArchDB

1czf_A_77 - AR
1czf_A_106 - AR
1czf_A_129 - AR
1czf_A_137 - AR
1czf_A_143 - AR
1czf_A_152 - AR
1czf_A_159 - AR
1czf_A_165 - AR
1czf_A_182 - AR
1czf_A_188 - AR
1czf_A_196 - AR
1czf_A_204 - AR
1czf_A_209 - AR
1czf_A_218 - AR
1czf_A_295 - AR
1czf_A_304 - AR
1czf_A_98 - AR
1czf_A_90 - AR
1czf_A_106 - AR
1czf_A_129 - AR
1czf_A_143 - AR
1czf_A_152 - AR
1czf_A_165 - AR
1czf_A_196 - AR
1czf_A_295 - AR
1czf_A_323 - AR
1czf_A_77 - AR
1czf_A_304 - AR
1czf_A_47 - AR
1czf_A_54 - AR
1czf_A_61 - AR
1czf_A_71 - AR
1czf_A_265 - HA
1czf_A_237 - HA
1czf_A_225 - HA
1czf_A_225 - HA
1czf_A_265 - HA

1czf A - percentage of sequence identity: 100
1czf B - percentage of sequence identity: 100
1ia5 A - percentage of sequence identity: 61
1ib4 A - percentage of sequence identity: 61
1ib4 B - percentage of sequence identity: 61