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Information on 1czy
PDB: 1czy
Compound: tumor necrosis factor receptor associated protein
Classification: APOPTOSIS
Entry date in PDB: 2000-03-08
Resolution [Å]: 2.00
R-Factor: 0.206


CHAIN: A
SWISS-PROT/TREMBL: Q12933
   KEYWORD: 3D-structure    Alternative splicing    Apoptosis    Coiled coil    Repeat    Ubl conjugation    Zinc-finger   
SCOP: b.8.1.1 All beta proteins    TRAF domain-like    TRAF domain-like    TRAF domain    TNF receptor associated factor 2 (TRAF2)    Human (Homo sapiens)
SCOP: h.1.2.1 Coiled coil proteins    Parallel coiled-coil    Trimerization domain of TRAF    Trimerization domain of TRAF    TRAF2    Human (Homo sapiens)
GO:  ubiquitin ligase complex    ubiquitin-protein ligase activity    zinc ion binding    protein ubiquitination   


CHAIN: B
SWISS-PROT/TREMBL: Q12933
   KEYWORD: 3D-structure    Alternative splicing    Apoptosis    Coiled coil    Repeat    Ubl conjugation    Zinc-finger   
SCOP: b.8.1.1 All beta proteins    TRAF domain-like    TRAF domain-like    TRAF domain    TNF receptor associated factor 2 (TRAF2)    Human (Homo sapiens)
SCOP: h.1.2.1 Coiled coil proteins    Parallel coiled-coil    Trimerization domain of TRAF    Trimerization domain of TRAF    TRAF2    Human (Homo sapiens)
GO:  ubiquitin ligase complex    ubiquitin-protein ligase activity    zinc ion binding    protein ubiquitination   


CHAIN: C
SWISS-PROT/TREMBL: Q12933
   KEYWORD: 3D-structure    Alternative splicing    Apoptosis    Coiled coil    Repeat    Ubl conjugation    Zinc-finger   
SCOP: b.8.1.1 All beta proteins    TRAF domain-like    TRAF domain-like    TRAF domain    TNF receptor associated factor 2 (TRAF2)    Human (Homo sapiens)
SCOP: h.1.2.1 Coiled coil proteins    Parallel coiled-coil    Trimerization domain of TRAF    Trimerization domain of TRAF    TRAF2    Human (Homo sapiens)
GO:  ubiquitin ligase complex    ubiquitin-protein ligase activity    zinc ion binding    protein ubiquitination   


CHAIN: D
SWISS-PROT/TREMBL: P03230
   KEYWORD: Oncogene    Phosphorylation    Transmembrane   
GO:  integral to membrane    viral transformation   


CHAIN: E
SWISS-PROT/TREMBL: P03230
   KEYWORD: Oncogene    Phosphorylation    Transmembrane   
GO:  integral to membrane    viral transformation   
1czy Image
Image Source: PDB

Stored Loops of 1czy

Loops in ArchDB40 clusters

1czy_A_361 - HE => SUBCLASS : 4.2.5
1czy_A_430 - HA => SUBCLASS : 5.2.5
1czy_A_353 - EH => SUBCLASS : 2.6.3

Loops in ArchDB95 clusters

1czy_A_353 - EH => SUBCLASS : 2.6.2
1czy_A_376 - AR => SUBCLASS : 2.9.1
1czy_A_361 - HE => SUBCLASS : 4.4.1
1czy_A_381 - HA => SUBCLASS : 4.2.1

Loops not clustered in ArchDB

1czy_A_406 - AR
1czy_A_443 - AR
1czy_A_467 - AR
1czy_A_389 - HA
1czy_A_335 - HE

Homologous structures to 1czy classified in ArchDB

1ca4 A - percentage of sequence identity: 99
1ca4 B - percentage of sequence identity: 99
1ca4 C - percentage of sequence identity: 99
1ca4 D - percentage of sequence identity: 99
1ca4 E - percentage of sequence identity: 99
1ca4 F - percentage of sequence identity: 99
1ca9 A - percentage of sequence identity: 99
1ca9 B - percentage of sequence identity: 99
1ca9 C - percentage of sequence identity: 99
1ca9 D - percentage of sequence identity: 99
1ca9 E - percentage of sequence identity: 99
1ca9 F - percentage of sequence identity: 99
1czy A - percentage of sequence identity: 100
1czy B - percentage of sequence identity: 100
1czy C - percentage of sequence identity: 100
1czz A - percentage of sequence identity: 100
1czz B - percentage of sequence identity: 100
1czz C - percentage of sequence identity: 100
1d00 A - percentage of sequence identity: 99
1d00 B - percentage of sequence identity: 99
1d00 C - percentage of sequence identity: 99
1d00 D - percentage of sequence identity: 99
1d00 E - percentage of sequence identity: 99
1d00 F - percentage of sequence identity: 99
1d00 G - percentage of sequence identity: 99
1d00 H - percentage of sequence identity: 99
1d01 A - percentage of sequence identity: 100
1d01 B - percentage of sequence identity: 100
1d01 C - percentage of sequence identity: 100
1d01 D - percentage of sequence identity: 100
1d01 E - percentage of sequence identity: 100
1d01 F - percentage of sequence identity: 100
1d0a A - percentage of sequence identity: 100
1d0a B - percentage of sequence identity: 100
1d0a C - percentage of sequence identity: 100
1d0a D - percentage of sequence identity: 100
1d0a E - percentage of sequence identity: 100
1d0a F - percentage of sequence identity: 100
1d0j A - percentage of sequence identity: 99
1d0j B - percentage of sequence identity: 99
1d0j C - percentage of sequence identity: 99
1d0j D - percentage of sequence identity: 99
1d0j E - percentage of sequence identity: 99
1d0j F - percentage of sequence identity: 99
1f3v B - percentage of sequence identity: 100
1qsc A - percentage of sequence identity: 99
1qsc B - percentage of sequence identity: 99
1qsc C - percentage of sequence identity: 99