ArchDB - Biological DataBase of Protein Loops

Information on 1d1t

PDB: 1d1t
Compound: alcohol dehydrogenase class iv sigma chain
Classification: OXIDOREDUCTASE
Entry date in PDB: 1999-09-29
Resolution [Å]: 2.40
R-Factor: 0.216

CHAIN: A

SWISS-PROT/TREMBL: P40394
   KEYWORD: 3D-structure    Metal-binding    Multigene family    NAD    Oxidoreductase    Zinc    3D-structure    Metal-binding    Multigene family    NAD    Oxidoreductase    Zinc
EC: 1.1.1.1
SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Alcohol dehydrogenase    Human (Homo sapiens), different isozymes
SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Alcohol dehydrogenase    Human (Homo sapiens), different isozymes
SCOP: c.2.1.1 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Alcohol dehydrogenase-like, C-terminal domain    Alcohol dehydrogenase    Human (Homo sapiens), different isozymes
GO:  oxidoreductase activity    zinc ion binding

CHAIN: B

CHAIN: C

CHAIN: D

Image Source: PDB

Stored Loops of 1d1t

Loops in ArchDB95 clusters

1d1t_A_346 - EH => SUBCLASS : 1.2.1
1d1t_A_346 - EH => SUBCLASS : 1.2.3
1d1t_A_218 - EH => SUBCLASS : 2.1.5
1d1t_A_313 - EH => SUBCLASS : 5.36.1
1d1t_A_157 - EH => SUBCLASS : 6.4.1
1d1t_A_88 - EH => SUBCLASS : 8.9.1
1d1t_A_288 - EH => SUBCLASS : 13.5.1
1d1t_A_149 - AR => SUBCLASS : 3.2.2
1d1t_A_22 - AR => SUBCLASS : 6.2.1
1d1t_A_306 - HE => SUBCLASS : 2.5.1
1d1t_A_202 - HE => SUBCLASS : 3.1.1
1d1t_A_229 - HE => SUBCLASS : 3.1.2
1d1t_A_175 - HE => SUBCLASS : 6.4.1
1d1t_A_175 - HE => SUBCLASS : 6.13.1
1d1t_A_272 - HE => SUBCLASS : 6.43.1
1d1t_A_324 - HE => SUBCLASS : 8.3.1
1d1t_A_7 - HA => SUBCLASS : 7.2.1

Loops in ArchDB-EC clusters

1d1t_A_324 - HE => SUBCLASS : 8.3.1

Loops not clustered in ArchDB

1d1t_A_149 - AR
1d1t_A_136 - AR
1d1t_A_22 - AR
1d1t_A_136 - AR
1d1t_A_35 - EH
1d1t_A_264 - EH
1d1t_A_194 - EH
1d1t_A_239 - EH
1d1t_A_130 - HA
1d1t_A_68 - HA
1d1t_A_7 - HA
1d1t_A_68 - HA
1d1t_A_130 - HA
1d1t_A_47 - HE
1d1t_A_355 - HE
1d1t_A_250 - HE
1d1t_A_101 - HE
1d1t_A_166 - HH

Homologous structures to 1d1t classified in ArchDB

1a71 A - percentage of sequence identity: 70
1a71 B - percentage of sequence identity: 70
1a72 - - percentage of sequence identity: 70
1adb A - percentage of sequence identity: 70
1adb B - percentage of sequence identity: 70
1adc A - percentage of sequence identity: 70
1adc B - percentage of sequence identity: 70
1adf - - percentage of sequence identity: 70
1adg - - percentage of sequence identity: 70
1agn A - percentage of sequence identity: 99
1agn B - percentage of sequence identity: 99
1agn C - percentage of sequence identity: 99
1agn D - percentage of sequence identity: 99
1axe A - percentage of sequence identity: 70
1axe B - percentage of sequence identity: 70
1axg A - percentage of sequence identity: 70
1axg B - percentage of sequence identity: 70
1axg C - percentage of sequence identity: 70
1axg D - percentage of sequence identity: 70
1bto A - percentage of sequence identity: 70
1bto B - percentage of sequence identity: 70
1bto C - percentage of sequence identity: 70
1bto D - percentage of sequence identity: 70
1d1s A - percentage of sequence identity: 99
1d1s B - percentage of sequence identity: 99
1d1s C - percentage of sequence identity: 99
1d1s D - percentage of sequence identity: 99
1d1t A - percentage of sequence identity: 100
1d1t B - percentage of sequence identity: 100
1d1t C - percentage of sequence identity: 100
1d1t D - percentage of sequence identity: 100
1deh A - percentage of sequence identity: 69
1deh B - percentage of sequence identity: 69
1ee2 A - percentage of sequence identity: 70
1ee2 B - percentage of sequence identity: 70
1hdx A - percentage of sequence identity: 69
1hdx B - percentage of sequence identity: 69
1hdy A - percentage of sequence identity: 69
1hdy B - percentage of sequence identity: 69
1hdz A - percentage of sequence identity: 69
1hdz B - percentage of sequence identity: 69
1het A - percentage of sequence identity: 70
1het B - percentage of sequence identity: 70
1heu A - percentage of sequence identity: 70
1heu B - percentage of sequence identity: 70
1hf3 A - percentage of sequence identity: 70
1hf3 B - percentage of sequence identity: 70
1hld A - percentage of sequence identity: 70
1hld B - percentage of sequence identity: 70
1hso A - percentage of sequence identity: 68
1hso B - percentage of sequence identity: 68
1hsz A - percentage of sequence identity: 69
1hsz B - percentage of sequence identity: 69
1ht0 A - percentage of sequence identity: 69
1ht0 B - percentage of sequence identity: 69
1htb A - percentage of sequence identity: 69
1htb B - percentage of sequence identity: 69
1ju9 A - percentage of sequence identity: 70
1ju9 B - percentage of sequence identity: 70
1lde A - percentage of sequence identity: 70
1lde B - percentage of sequence identity: 70
1lde C - percentage of sequence identity: 70
1lde D - percentage of sequence identity: 70
1ldy A - percentage of sequence identity: 70
1ldy B - percentage of sequence identity: 70
1ldy C - percentage of sequence identity: 70
1ldy D - percentage of sequence identity: 70
1m6h A - percentage of sequence identity: 60
1m6h B - percentage of sequence identity: 60
1m6w A - percentage of sequence identity: 60
1m6w B - percentage of sequence identity: 60
1ma0 A - percentage of sequence identity: 60
1ma0 B - percentage of sequence identity: 60
1mc5 A - percentage of sequence identity: 60
1mc5 B - percentage of sequence identity: 60
1mg0 A - percentage of sequence identity: 70
1mg0 B - percentage of sequence identity: 70
1mg0 C - percentage of sequence identity: 70
1mg0 D - percentage of sequence identity: 70
1mgo A - percentage of sequence identity: 70
1mgo B - percentage of sequence identity: 70
1mp0 A - percentage of sequence identity: 60
1mp0 B - percentage of sequence identity: 60
1n8k A - percentage of sequence identity: 70
1n8k B - percentage of sequence identity: 70
1n92 A - percentage of sequence identity: 70
1n92 B - percentage of sequence identity: 70
1p1r A - percentage of sequence identity: 70
1p1r B - percentage of sequence identity: 70
1p1r C - percentage of sequence identity: 70
1p1r D - percentage of sequence identity: 70
1qlh A - percentage of sequence identity: 70
1qlj A - percentage of sequence identity: 70
1qv6 A - percentage of sequence identity: 70
1qv6 B - percentage of sequence identity: 70
1qv7 A - percentage of sequence identity: 70
1qv7 B - percentage of sequence identity: 70
1teh A - percentage of sequence identity: 60
1teh B - percentage of sequence identity: 60
1u3t A - percentage of sequence identity: 68
1u3t B - percentage of sequence identity: 68
1u3u A - percentage of sequence identity: 69
1u3u B - percentage of sequence identity: 69
1u3v A - percentage of sequence identity: 69
1u3v B - percentage of sequence identity: 69
1u3w A - percentage of sequence identity: 69
1u3w B - percentage of sequence identity: 69
1ye3 A - percentage of sequence identity: 70
2ohx A - percentage of sequence identity: 70
2ohx B - percentage of sequence identity: 70
2oxi A - percentage of sequence identity: 70
2oxi B - percentage of sequence identity: 70
3bto A - percentage of sequence identity: 70
3bto B - percentage of sequence identity: 70
3bto C - percentage of sequence identity: 70
3bto D - percentage of sequence identity: 70
3hud A - percentage of sequence identity: 69
3hud B - percentage of sequence identity: 69
5adh - - percentage of sequence identity: 70
6adh A - percentage of sequence identity: 70
6adh B - percentage of sequence identity: 70
7adh - - percentage of sequence identity: 70
8adh - - percentage of sequence identity: 70