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Information on 1d8d
PDB: 1d8d
Compound: farnesyltransferase (alpha subunit)
Classification: TRANSFERASE
Entry date in PDB: 2000-02-09
Resolution [Å]: 2.00
R-Factor: 0.164


CHAIN: A
SWISS-PROT/TREMBL: Q04631
   KEYWORD: 3D-structure    Prenyltransferase    Repeat    Transferase   
EC: 2.5.1.58
SCOP: a.118.6.1 All alpha proteins    alpha-alpha superhelix    Protein prenylyltransferase    Protein prenylyltransferase    Protein farnesyltransferase alpha-subunit    Rat (Rattus norvegicus)
GO:  protein prenyltransferase activity    protein amino acid prenylation   


CHAIN: B
SWISS-PROT/TREMBL: Q02293
   KEYWORD: 3D-structure    Prenyltransferase    Repeat    Transferase    Zinc   
EC: 2.5.1.58
SCOP: a.102.4.3 All alpha proteins    alpha/alpha toroid    Terpenoid cyclases/Protein prenyltransferases    Protein prenyltransferases    Protein farnesyltransferase, beta-subunit    Rat (Rattus norvegicus)
GO:  catalytic activity   


CHAIN: P
SWISS-PROT/TREMBL: P01116
   KEYWORD: Alternative splicing    Disease mutation    GTP-binding    Lipoprotein    Palmitate    Prenylation    Proto-oncogene   
GO:  GTP binding    small GTPase mediated signal transduction   
1d8d Image
Image Source: PDB

Stored Loops of 1d8d

Loops in ArchDB95 clusters

1d8d_A_166 - HH => SUBCLASS : 2.5.8
1d8d_A_148 - HH => SUBCLASS : 4.2.1

Loops not clustered in ArchDB

1d8d_A_94 - HH
1d8d_A_309 - HH
1d8d_A_303 - HH
1d8d_A_293 - HH
1d8d_A_274 - HH
1d8d_A_253 - HH
1d8d_A_234 - HH
1d8d_A_219 - HH
1d8d_A_200 - HH
1d8d_A_185 - HH
1d8d_A_131 - HH
1d8d_A_114 - HH
1d8d_A_330 - HH

Homologous structures to 1d8d classified in ArchDB

1d8e A - percentage of sequence identity: 100
1fpp A - percentage of sequence identity: 100
1ft1 A - percentage of sequence identity: 100
1ft2 A - percentage of sequence identity: 100
1jcq A - percentage of sequence identity: 92
1jcr A - percentage of sequence identity: 100
1jcs A - percentage of sequence identity: 100
1kzo A - percentage of sequence identity: 100
1kzp A - percentage of sequence identity: 100
1ld7 A - percentage of sequence identity: 92
1ld8 A - percentage of sequence identity: 92
1ld8 B - percentage of sequence identity: 96
1mzc A - percentage of sequence identity: 92
1n4p A - percentage of sequence identity: 100
1n4p C - percentage of sequence identity: 100
1n4p E - percentage of sequence identity: 100
1n4p G - percentage of sequence identity: 100
1n4p I - percentage of sequence identity: 100
1n4p K - percentage of sequence identity: 100
1n4q A - percentage of sequence identity: 100
1n4q C - percentage of sequence identity: 100
1n4q E - percentage of sequence identity: 100
1n4q G - percentage of sequence identity: 100
1n4q I - percentage of sequence identity: 100
1n4q K - percentage of sequence identity: 100
1n4r A - percentage of sequence identity: 100
1n4r C - percentage of sequence identity: 100
1n4r E - percentage of sequence identity: 100
1n4r G - percentage of sequence identity: 100
1n4r I - percentage of sequence identity: 100
1n4r K - percentage of sequence identity: 100
1n4s A - percentage of sequence identity: 100
1n4s C - percentage of sequence identity: 100
1n4s E - percentage of sequence identity: 100
1n4s G - percentage of sequence identity: 100
1n4s I - percentage of sequence identity: 100
1n4s K - percentage of sequence identity: 100
1n94 A - percentage of sequence identity: 100
1n95 A - percentage of sequence identity: 99
1n9a A - percentage of sequence identity: 99
1ni1 A - percentage of sequence identity: 99
1nl4 A - percentage of sequence identity: 99
1o1r A - percentage of sequence identity: 99
1o1s A - percentage of sequence identity: 99
1o1t A - percentage of sequence identity: 99
1o5m A - percentage of sequence identity: 99
1qbq A - percentage of sequence identity: 99
1s63 A - percentage of sequence identity: 92
1s64 A - percentage of sequence identity: 100
1s64 C - percentage of sequence identity: 100
1s64 E - percentage of sequence identity: 100
1s64 G - percentage of sequence identity: 100
1s64 I - percentage of sequence identity: 100
1s64 K - percentage of sequence identity: 100
1sa4 A - percentage of sequence identity: 92
1sa5 A - percentage of sequence identity: 100
1tn6 A - percentage of sequence identity: 92
1tn7 A - percentage of sequence identity: 100
1tn8 A - percentage of sequence identity: 100
1tnb A - percentage of sequence identity: 100
1tnb C - percentage of sequence identity: 100
1tnb E - percentage of sequence identity: 100
1tnb G - percentage of sequence identity: 100
1tnb I - percentage of sequence identity: 100
1tnb K - percentage of sequence identity: 100
1tno A - percentage of sequence identity: 100
1tno C - percentage of sequence identity: 100
1tno E - percentage of sequence identity: 100
1tno G - percentage of sequence identity: 100
1tno I - percentage of sequence identity: 100
1tno K - percentage of sequence identity: 100
1tnu A - percentage of sequence identity: 100
1tnu C - percentage of sequence identity: 100
1tnu E - percentage of sequence identity: 100
1tnu G - percentage of sequence identity: 100
1tnu I - percentage of sequence identity: 100
1tnu K - percentage of sequence identity: 100
1tny A - percentage of sequence identity: 100
1tny C - percentage of sequence identity: 100
1tny E - percentage of sequence identity: 100
1tny G - percentage of sequence identity: 100
1tny I - percentage of sequence identity: 100
1tny K - percentage of sequence identity: 100
1tnz A - percentage of sequence identity: 100
1tnz C - percentage of sequence identity: 100
1tnz E - percentage of sequence identity: 100
1tnz G - percentage of sequence identity: 100
1tnz I - percentage of sequence identity: 100
1tnz K - percentage of sequence identity: 100
1x81 A - percentage of sequence identity: 100