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Information on 1dan
PDB: 1dan
Compound: blood coagulation factor viia
Classification: COMPLEX(SERINE PROTEASE/COFACTOR/LIGAND)
Entry date in PDB: 1997-09-04
Resolution [Å]: 2.00
R-Factor: 0.187


CHAIN: H
SWISS-PROT/TREMBL: P08709
   KEYWORD: 3D-structure    Alternative splicing    Blood coagulation    Calcium-binding    Disease mutation    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Hydroxylation    Pharmaceutical    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen   
EC: 3.4.21.21
SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Coagulation factor VIIa    Human (Homo sapiens)
GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis   


CHAIN: L
SWISS-PROT/TREMBL: P08709
   KEYWORD: 3D-structure    Alternative splicing    Blood coagulation    Calcium-binding    Disease mutation    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Hydroxylation    Pharmaceutical    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen   
EC: 3.4.21.21
SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Coagulation factor VIIa    Human (Homo sapiens)
SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Coagulation factor VIIa    Human (Homo sapiens)
SCOP: g.32.1.1 Small proteins    GLA-domain    GLA-domain    GLA-domain    Coagulation factor VIIa    Human (Homo sapiens)
GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis   


CHAIN: T
SWISS-PROT/TREMBL: P13726
   KEYWORD: 3D-structure    Blood coagulation    Glycoprotein    Lipoprotein    Palmitate    Polymorphism    Signal    Transmembrane   
SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Extracellular region of human tissue factor    Human (Homo sapiens)
GO:  integral to membrane    membrane    hematopoietin/interferon-class (D200-domain) cytokine receptor activity    blood coagulation   


CHAIN: U
SWISS-PROT/TREMBL: P13726
   KEYWORD: 3D-structure    Blood coagulation    Glycoprotein    Lipoprotein    Palmitate    Polymorphism    Signal    Transmembrane   
SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Extracellular region of human tissue factor    Human (Homo sapiens)
SCOP: b.1.2.1 All beta proteins    Immunoglobulin-like beta-sandwich    Fibronectin type III    Fibronectin type III    Extracellular region of human tissue factor    Human (Homo sapiens)
GO:  integral to membrane    membrane    hematopoietin/interferon-class (D200-domain) cytokine receptor activity    blood coagulation   
1dan Image
Image Source: PDB

Stored Loops of 1dan

Loops in ArchDB95 clusters

1dan_L_67 - AR => SUBCLASS : 3.10.2
1dan_L_60 - HA => SUBCLASS : 2.4.1
1dan_L_101 - HA => SUBCLASS : 5.3.1
1dan_L_76 - HA => SUBCLASS : 5.14.1

Loops not clustered in ArchDB

1dan_L_83 - AR
1dan_L_111 - AR
1dan_L_118 - HA
1dan_L_37 - HE

Homologous structures to 1dan classified in ArchDB

1a21 A - percentage of sequence identity: 80
1bf9 - - percentage of sequence identity: 100
1cfh - - percentage of sequence identity: 64
1cfi - - percentage of sequence identity: 64
1cvw L - percentage of sequence identity: 100
1dva L - percentage of sequence identity: 100
1dva M - percentage of sequence identity: 100
1edm C - percentage of sequence identity: 67
1f7e A - percentage of sequence identity: 100
1f7m A - percentage of sequence identity: 100
1fak L - percentage of sequence identity: 100
1ff7 A - percentage of sequence identity: 100
1ffm A - percentage of sequence identity: 100
1iod G - percentage of sequence identity: 65
1ixa - - percentage of sequence identity: 67
1j34 C - percentage of sequence identity: 65
1j35 C - percentage of sequence identity: 65
1j9c L - percentage of sequence identity: 100
1kli H - percentage of sequence identity: 100
1kli L - percentage of sequence identity: 100
1klj L - percentage of sequence identity: 100
1lqv C - percentage of sequence identity: 72
1lqv D - percentage of sequence identity: 72
1mgx - - percentage of sequence identity: 64
1o5d L - percentage of sequence identity: 100
1qfk L - percentage of sequence identity: 100
1w0y L - percentage of sequence identity: 100
1w2k L - percentage of sequence identity: 100
1w7x L - percentage of sequence identity: 100
1w8b L - percentage of sequence identity: 100
1whe - - percentage of sequence identity: 60
1whf - - percentage of sequence identity: 60
1wqv L - percentage of sequence identity: 100
1wss L - percentage of sequence identity: 100
1wtg L - percentage of sequence identity: 100
1wun L - percentage of sequence identity: 100
1wv7 L - percentage of sequence identity: 100
1ygc L - percentage of sequence identity: 100
1z6j L - percentage of sequence identity: 100
2b7d L - percentage of sequence identity: 100
2hft - - percentage of sequence identity: 94