PDB: 1dg6 Compound: apo2lTNF-RELATED APOPOTIS INDUCING LIGAND (trail) Classification: APOPTOSIS Entry date in PDB: 2000-01-27 Resolution [Å]: 1.30 R-Factor: 0.141

CHAIN: A SWISS-PROT/TREMBL: P50591    KEYWORD: 3D-structure    Apoptosis    Cytokine    Metal-binding    Signal-anchor    Transmembrane    Zinc    SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Apoptosis-2 ligand, apo2l/TRAIL    Human (Homo sapiens) GO:  membrane    tumor necrosis factor receptor binding    immune response

Image Source: PDB

Loops in ArchDB40 clusters

1dg6_A_167 - HA => SUBCLASS : 2.1.1
1dg6_A_173 - AR => SUBCLASS : 3.2.13
1dg6_A_266 - AR => SUBCLASS : 5.29.1

Loops in ArchDB95 clusters

1dg6_A_163 - AR => SUBCLASS : 1.1.7
1dg6_A_173 - AR => SUBCLASS : 3.1.20
1dg6_A_237 - AR => SUBCLASS : 3.5.6
1dg6_A_266 - AR => SUBCLASS : 5.34.1
1dg6_A_167 - HA => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1dg6_A_123 - AR
1dg6_A_149 - AR
1dg6_A_180 - AR
1dg6_A_220 - AR
1dg6_A_255 - AR
1dg6_A_205 - HA

1d0g A - percentage of sequence identity: 99
1d0g B - percentage of sequence identity: 99
1d0g D - percentage of sequence identity: 99
1d2q A - percentage of sequence identity: 99
1d4v B - percentage of sequence identity: 99
1du3 D - percentage of sequence identity: 99
1du3 E - percentage of sequence identity: 99
1du3 F - percentage of sequence identity: 99
1du3 J - percentage of sequence identity: 99
1du3 K - percentage of sequence identity: 99
1du3 L - percentage of sequence identity: 99