PDB: 1dpe Compound: dipeptide-binding protein Classification: PEPTIDE TRANSPORT Entry date in PDB: 1996-08-17 Resolution [Å]: 2.00 R-Factor: 0.169

CHAIN: - SWISS-PROT/TREMBL: P23847    KEYWORD: 3D-structure    Chemotaxis    Complete proteome    Peptide transport    Periplasmic    Signal    Transport    SCOP: c.94.1.1 Alpha and beta proteins (a/b)    Periplasmic binding protein-like II    Periplasmic binding protein-like II    Phosphate binding protein-like    Dipeptide-binding protein    Escherichia coli GO:  transporter activity    transport

Image Source: PDB

Loops in ArchDB40 clusters

1dpe_*_361 - HE => SUBCLASS : 1.1.3
1dpe_*_245 - HE => SUBCLASS : 3.4.2
1dpe_*_123 - HA => SUBCLASS : 2.2.1
1dpe_*_51 - HA => SUBCLASS : 5.2.1
1dpe_*_37 - HA => SUBCLASS : 6.4.1
1dpe_*_213 - EH => SUBCLASS : 2.1.2
1dpe_*_377 - EH => SUBCLASS : 2.2.2
1dpe_*_413 - HH => SUBCLASS : 1.1.7
1dpe_*_113 - HH => SUBCLASS : 1.3.4
1dpe_*_160 - HH => SUBCLASS : 1.3.10
1dpe_*_279 - HH => SUBCLASS : 2.1.13
1dpe_*_437 - HH => SUBCLASS : 3.4.2

Loops in ArchDB95 clusters

1dpe_*_213 - EH => SUBCLASS : 2.1.3
1dpe_*_377 - EH => SUBCLASS : 2.2.3
1dpe_*_377 - EH => SUBCLASS : 3.1.8
1dpe_*_413 - HH => SUBCLASS : 1.1.6
1dpe_*_413 - HH => SUBCLASS : 1.1.10
1dpe_*_113 - HH => SUBCLASS : 1.3.5
1dpe_*_160 - HH => SUBCLASS : 1.3.13
1dpe_*_279 - HH => SUBCLASS : 2.1.34
1dpe_*_437 - HH => SUBCLASS : 3.3.2
1dpe_*_361 - HE => SUBCLASS : 1.1.2
1dpe_*_361 - HE => SUBCLASS : 1.2.1
1dpe_*_245 - HE => SUBCLASS : 3.4.1
1dpe_*_123 - HA => SUBCLASS : 2.2.1
1dpe_*_185 - HA => SUBCLASS : 3.3.11
1dpe_*_51 - HA => SUBCLASS : 5.2.1
1dpe_*_37 - HA => SUBCLASS : 6.5.1

Loops not clustered in ArchDB

1dpe_*_46 - AR
1dpe_*_254 - AR
1dpe_*_400 - EH
1dpe_*_344 - EH
1dpe_*_303 - EH
1dpe_*_263 - EH
1dpe_*_134 - EH
1dpe_*_62 - EH
1dpe_*_2 - EH
1dpe_*_488 - HA
1dpe_*_472 - HA
1dpe_*_195 - HA
1dpe_*_452 - HE
1dpe_*_386 - HE
1dpe_*_328 - HE
1dpe_*_291 - HE
1dpe_*_174 - HE
1dpe_*_120 - HE
1dpe_*_29 - HE
1dpe_*_22 - HH
1dpe_*_87 - HH
1dpe_*_146 - HH
1dpe_*_222 - HH
1dpe_*_422 - HH

1dpp A - percentage of sequence identity: 99
1dpp C - percentage of sequence identity: 99
1dpp E - percentage of sequence identity: 99
1dpp G - percentage of sequence identity: 99