PDB: 1dqs Compound: 3-dehydroquinate synthase Classification: LYASE Entry date in PDB: 1999-07-26 Resolution [Å]: 1.80 R-Factor: 0.174

CHAIN: A SWISS-PROT/TREMBL: P07547    KEYWORD: 3D-structure    Aromatic amino acid biosynthesis    ATP-binding    Kinase    Lyase    Multifunctional enzyme    NADP    Oxidoreductase    Transferase    EC: 1.1.1.25 SCOP: e.22.1.1 Multi-domain proteins (alpha and beta)    Dehydroquinate synthase-like    Dehydroquinate synthase-like    Dehydroquinate synthase, DHQS    Dehydroquinate synthase, DHQS    Aspergillus nidulans GO:  cytoplasm    3-dehydroquinate dehydratase activity    3-dehydroquinate synthase activity    3-phosphoshikimate 1-carboxyvinyltransferase activity    ATP binding    shikimate 5-dehydrogenase activity    shikimate kinase activity    amino acid biosynthesis    aromatic amino acid family biosynthesis    aromatic amino acid family biosynthesis, shikimate pathway    CHAIN: B SWISS-PROT/TREMBL: P07547    KEYWORD: 3D-structure    Aromatic amino acid biosynthesis    ATP-binding    Kinase    Lyase    Multifunctional enzyme    NADP    Oxidoreductase    Transferase    EC: 1.1.1.25 SCOP: e.22.1.1 Multi-domain proteins (alpha and beta)    Dehydroquinate synthase-like    Dehydroquinate synthase-like    Dehydroquinate synthase, DHQS    Dehydroquinate synthase, DHQS    Aspergillus nidulans GO:  cytoplasm    3-dehydroquinate dehydratase activity    3-dehydroquinate synthase activity    3-phosphoshikimate 1-carboxyvinyltransferase activity    ATP binding    shikimate 5-dehydrogenase activity    shikimate kinase activity    amino acid biosynthesis    aromatic amino acid family biosynthesis    aromatic amino acid family biosynthesis, shikimate pathway

Image Source: PDB

Loops in ArchDB40 clusters

1dqs_A_5 - HA => SUBCLASS : 2.1.1
1dqs_A_368 - HA => SUBCLASS : 2.5.1
1dqs_A_380 - EH => SUBCLASS : 0.1.27
1dqs_A_380 - EH => SUBCLASS : 1.1.5
1dqs_A_373 - AR => SUBCLASS : 3.9.2
1dqs_A_160 - AR => SUBCLASS : 4.46.1
1dqs_A_287 - HH => SUBCLASS : 4.1.3

Loops in ArchDB95 clusters

1dqs_A_380 - EH => SUBCLASS : 1.1.3
1dqs_A_38 - EH => SUBCLASS : 1.2.3
1dqs_A_12 - EH => SUBCLASS : 3.35.1
1dqs_A_160 - AR => SUBCLASS : 3.8.4
1dqs_A_287 - HH => SUBCLASS : 4.1.2
1dqs_A_5 - HA => SUBCLASS : 2.1.1
1dqs_A_368 - HA => SUBCLASS : 2.4.2

Loops in ArchDB-EC clusters

1dqs_A_271 - HH => SUBCLASS : 5.10.2

Loops not clustered in ArchDB

1dqs_A_373 - AR
1dqs_A_364 - AR
1dqs_A_160 - AR
1dqs_A_364 - AR
1dqs_A_71 - EH
1dqs_A_172 - EH
1dqs_A_133 - EH
1dqs_A_108 - EH
1dqs_A_152 - HA
1dqs_A_368 - HA
1dqs_A_5 - HA
1dqs_A_152 - HA
1dqs_A_141 - HE
1dqs_A_86 - HE
1dqs_A_26 - HE
1dqs_A_115 - HE
1dqs_A_345 - HE
1dqs_A_48 - HE
1dqs_A_332 - HH
1dqs_A_310 - HH
1dqs_A_236 - HH
1dqs_A_185 - HH
1dqs_A_21 - HH
1dqs_A_204 - HH

1dqs A - percentage of sequence identity: 100
1dqs B - percentage of sequence identity: 100
1nr5 A - percentage of sequence identity: 100
1nr5 B - percentage of sequence identity: 100
1nrx A - percentage of sequence identity: 100
1nrx B - percentage of sequence identity: 100
1nua A - percentage of sequence identity: 100
1nua B - percentage of sequence identity: 100
1nva A - percentage of sequence identity: 100
1nva B - percentage of sequence identity: 100
1nvb A - percentage of sequence identity: 100
1nvb B - percentage of sequence identity: 100
1nvd A - percentage of sequence identity: 100
1nvd B - percentage of sequence identity: 100
1nve A - percentage of sequence identity: 100
1nve B - percentage of sequence identity: 100
1nve C - percentage of sequence identity: 100
1nve D - percentage of sequence identity: 100
1nvf A - percentage of sequence identity: 100
1nvf B - percentage of sequence identity: 100
1nvf C - percentage of sequence identity: 100
1sg6 A - percentage of sequence identity: 100
1sg6 B - percentage of sequence identity: 100