PDB: 1e3m Compound: DNA mismatch repair protein muts Classification: DNA BINDING Entry date in PDB: 2000-11-01 Resolution [Å]: 2.20 R-Factor: 0.229

CHAIN: A SWISS-PROT/TREMBL: P23909    KEYWORD: 3D-structure    ATP-binding    Complete proteome    DNA repair    DNA-binding    SCOP: a.113.1.1 All alpha proteins    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    Escherichia coli SCOP: c.37.1.12 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    ABC transporter ATPase domain-like    DNA repair protein MutS, the C-terminal domain    Escherichia coli SCOP: c.55.6.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    Escherichia coli SCOP: d.75.2.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    Escherichia coli GO:  cytoplasm    ATP binding    damaged DNA binding    DNA binding    DNA metabolism    DNA repair    mismatch repair    CHAIN: B SWISS-PROT/TREMBL: P23909    KEYWORD: 3D-structure    ATP-binding    Complete proteome    DNA repair    DNA-binding    SCOP: a.113.1.1 All alpha proteins    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    Escherichia coli SCOP: c.37.1.12 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    ABC transporter ATPase domain-like    DNA repair protein MutS, the C-terminal domain    Escherichia coli SCOP: c.55.6.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    Escherichia coli SCOP: d.75.2.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    Escherichia coli GO:  cytoplasm    ATP binding    damaged DNA binding    DNA binding    DNA metabolism    DNA repair    mismatch repair

Image Source: PDB

Loops in ArchDB40 clusters

1e3m_A_76 - HE => SUBCLASS : 2.1.1
1e3m_A_168 - HE => SUBCLASS : 3.1.1
1e3m_A_443 - HE => SUBCLASS : 4.34.1
1e3m_A_539 - HE => SUBCLASS : 5.9.2
1e3m_A_443 - HE => SUBCLASS : 5.34.1
1e3m_A_676 - HE => SUBCLASS : 5.39.1
1e3m_A_133 - HA => SUBCLASS : 2.2.1
1e3m_A_493 - HA => SUBCLASS : 2.2.3
1e3m_A_464 - HA => SUBCLASS : 3.2.5
1e3m_A_143 - HA => SUBCLASS : 4.1.1
1e3m_A_143 - HA => SUBCLASS : 6.1.1
1e3m_A_498 - EH => SUBCLASS : 1.1.4
1e3m_A_36 - EH => SUBCLASS : 1.2.21
1e3m_A_70 - EH => SUBCLASS : 1.3.1
1e3m_A_196 - EH => SUBCLASS : 6.34.1
1e3m_A_644 - AR => SUBCLASS : 4.18.1
1e3m_A_772 - HH => SUBCLASS : 3.3.4
1e3m_A_375 - HH => SUBCLASS : 3.22.1
1e3m_A_348 - HH => SUBCLASS : 4.5.1

Loops in ArchDB95 clusters

1e3m_B_498 - EH => SUBCLASS : 1.1.4
1e3m_B_70 - EH => SUBCLASS : 1.2.1
1e3m_A_36 - EH => SUBCLASS : 1.3.21
1e3m_B_498 - EH => SUBCLASS : 2.2.1
1e3m_B_196 - EH => SUBCLASS : 6.6.2
1e3m_A_196 - EH => SUBCLASS : 6.6.2
1e3m_A_644 - AR => SUBCLASS : 4.16.1
1e3m_B_644 - AR => SUBCLASS : 4.16.1
1e3m_A_772 - HH => SUBCLASS : 3.2.4
1e3m_A_375 - HH => SUBCLASS : 3.9.1
1e3m_B_370 - HH => SUBCLASS : 3.9.1
1e3m_B_370 - HH => SUBCLASS : 3.33.1
1e3m_A_348 - HH => SUBCLASS : 4.4.1
1e3m_B_76 - HE => SUBCLASS : 1.2.3
1e3m_B_76 - HE => SUBCLASS : 3.2.1
1e3m_A_168 - HE => SUBCLASS : 3.3.2
1e3m_A_443 - HE => SUBCLASS : 4.7.4
1e3m_A_676 - HE => SUBCLASS : 4.55.1
1e3m_B_539 - HE => SUBCLASS : 5.40.1
1e3m_A_539 - HE => SUBCLASS : 5.40.1
1e3m_B_431 - HE => SUBCLASS : 5.66.1
1e3m_A_443 - HE => SUBCLASS : 5.66.1
1e3m_A_133 - HA => SUBCLASS : 2.2.1
1e3m_A_493 - HA => SUBCLASS : 2.2.3
1e3m_B_750 - HA => SUBCLASS : 2.3.1
1e3m_A_133 - HA => SUBCLASS : 3.1.1
1e3m_A_464 - HA => SUBCLASS : 3.3.2
1e3m_A_143 - HA => SUBCLASS : 4.1.1
1e3m_A_143 - HA => SUBCLASS : 4.1.3

Loops not clustered in ArchDB

1e3m_A_744 - AR
1e3m_B_755 - AR
1e3m_A_756 - AR
1e3m_B_725 - AR
1e3m_B_599 - AR
1e3m_A_725 - AR
1e3m_B_571 - AR
1e3m_A_599 - AR
1e3m_B_472 - AR
1e3m_A_571 - AR
1e3m_B_744 - AR
1e3m_A_108 - AR
1e3m_B_110 - AR
1e3m_B_36 - EH
1e3m_A_762 - EH
1e3m_A_689 - EH
1e3m_A_653 - EH
1e3m_B_763 - EH
1e3m_B_689 - EH
1e3m_B_653 - EH
1e3m_B_611 - EH
1e3m_B_578 - EH
1e3m_B_155 - EH
1e3m_A_155 - EH
1e3m_A_611 - EH
1e3m_A_472 - EH
1e3m_B_722 - HA
1e3m_B_90 - HA
1e3m_B_133 - HA
1e3m_B_143 - HA
1e3m_B_177 - HA
1e3m_B_464 - HA
1e3m_B_493 - HA
1e3m_B_28 - HA
1e3m_A_28 - HA
1e3m_A_90 - HA
1e3m_A_578 - HA
1e3m_A_722 - HA
1e3m_A_750 - HA
1e3m_A_177 - HA
1e3m_A_16 - HE
1e3m_A_479 - HE
1e3m_A_626 - HE
1e3m_A_703 - HE
1e3m_A_41 - HE
1e3m_B_16 - HE
1e3m_B_41 - HE
1e3m_B_168 - HE
1e3m_B_588 - HE
1e3m_B_626 - HE
1e3m_B_676 - HE
1e3m_B_701 - HE
1e3m_B_271 - HH
1e3m_B_772 - HH
1e3m_B_619 - HH
1e3m_B_504 - HH
1e3m_B_401 - HH
1e3m_B_388 - HH
1e3m_B_362 - HH
1e3m_B_348 - HH
1e3m_B_335 - HH
1e3m_B_318 - HH
1e3m_B_308 - HH
1e3m_B_291 - HH
1e3m_B_231 - HH
1e3m_B_206 - HH
1e3m_A_431 - HH
1e3m_A_401 - HH
1e3m_A_388 - HH
1e3m_A_335 - HH
1e3m_A_308 - HH
1e3m_A_291 - HH
1e3m_A_271 - HH
1e3m_A_231 - HH
1e3m_A_206 - HH
1e3m_A_362 - HH
1e3m_A_318 - HH
1e3m_A_504 - HH

1e3m A - percentage of sequence identity: 100
1e3m B - percentage of sequence identity: 100
1ng9 A - percentage of sequence identity: 99
1ng9 B - percentage of sequence identity: 99
1oh5 A - percentage of sequence identity: 100
1oh5 B - percentage of sequence identity: 100
1oh6 A - percentage of sequence identity: 100
1oh6 B - percentage of sequence identity: 100
1oh7 A - percentage of sequence identity: 100
1oh7 B - percentage of sequence identity: 100
1oh8 A - percentage of sequence identity: 100
1oh8 B - percentage of sequence identity: 100
1w7a A - percentage of sequence identity: 100
1w7a B - percentage of sequence identity: 100
1wb9 A - percentage of sequence identity: 99
1wb9 B - percentage of sequence identity: 99
1wbb A - percentage of sequence identity: 99
1wbb B - percentage of sequence identity: 99
1wbd A - percentage of sequence identity: 99
1wbd B - percentage of sequence identity: 99