PDB: 1ega Compound: gtp-binding protein era Classification: HYDROLASE Entry date in PDB: 1999-07-12 Resolution [Å]: 2.40 R-Factor: 0.243

CHAIN: A SWISS-PROT/TREMBL: P06616    KEYWORD: 3D-structure    Complete proteome    GTP-binding    Membrane    Phosphorylation    RNA-binding    SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    GTPase Era, N-terminal domain    Escherichia coli SCOP: d.52.3.1 Alpha and beta proteins (a+b)    Alpha-lytic protease prodomain-like    Prokaryotic type KH domain (KH-domain type II)    Prokaryotic type KH domain (KH-domain type II)    GTPase Era C-terminal domain    Escherichia coli GO:  GTP binding    nucleic acid binding    CHAIN: B SWISS-PROT/TREMBL: P06616    KEYWORD: 3D-structure    Complete proteome    GTP-binding    Membrane    Phosphorylation    RNA-binding    SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    GTPase Era, N-terminal domain    Escherichia coli SCOP: d.52.3.1 Alpha and beta proteins (a+b)    Alpha-lytic protease prodomain-like    Prokaryotic type KH domain (KH-domain type II)    Prokaryotic type KH domain (KH-domain type II)    GTPase Era C-terminal domain    Escherichia coli GO:  GTP binding    nucleic acid binding

Image Source: PDB

Loops in ArchDB40 clusters

1ega_A_47 - HA => SUBCLASS : 2.3.1
1ega_A_229 - EH => SUBCLASS : 2.1.1
1ega_A_229 - EH => SUBCLASS : 2.1.2
1ega_A_7 - EH => SUBCLASS : 6.1.1
1ega_A_119 - EH => SUBCLASS : 7.17.1

Loops in ArchDB95 clusters

1ega_A_229 - EH => SUBCLASS : 2.1.1
1ega_A_7 - EH => SUBCLASS : 6.1.1
1ega_A_56 - EH => SUBCLASS : 6.12.1
1ega_A_119 - EH => SUBCLASS : 7.18.1
1ega_A_21 - HE => SUBCLASS : 3.1.1
1ega_A_103 - HE => SUBCLASS : 3.15.1
1ega_A_103 - HE => SUBCLASS : 4.3.9
1ega_A_47 - HA => SUBCLASS : 2.3.1

Loops not clustered in ArchDB

1ega_A_33 - AR
1ega_A_89 - EH
1ega_A_150 - EH
1ega_A_273 - EH
1ega_A_214 - HA
1ega_A_252 - HE
1ega_A_190 - HE
1ega_A_132 - HE
1ega_A_68 - HE
1ega_A_162 - HH
1ega_A_240 - HH

1ega A - percentage of sequence identity: 100
1ega B - percentage of sequence identity: 100
1x18 X - percentage of sequence identity: 100
1x1l X - percentage of sequence identity: 100