PDB: 1em8 Compound: DNA polymerase iii chi subunit Classification: GENE REGULATION Entry date in PDB: 2003-08-26 Resolution [Å]: 2.10 R-Factor: 0.229

CHAIN: A SWISS-PROT/TREMBL: P28905    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-directed DNA polymerase    Transferase    EC: 2.7.7.7 SCOP: c.128.1.1 Alpha and beta proteins (a/b)    DNA polymerase III chi subunit    DNA polymerase III chi subunit    DNA polymerase III chi subunit    DNA polymerase III chi subunit    Escherichia coli GO:  DNA binding    DNA-directed DNA polymerase activity    DNA replication    CHAIN: B SWISS-PROT/TREMBL: P28632    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-directed DNA polymerase    Transferase    EC: 2.7.7.7 SCOP: c.126.1.1 Alpha and beta proteins (a/b)    DNA polymerase III psi subunit    DNA polymerase III psi subunit    DNA polymerase III psi subunit    DNA polymerase III psi subunit    Escherichia coli GO:  3'-5' exonuclease activity    DNA-directed DNA polymerase activity    DNA replication    CHAIN: C SWISS-PROT/TREMBL: P28905    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-directed DNA polymerase    Transferase    EC: 2.7.7.7 SCOP: c.128.1.1 Alpha and beta proteins (a/b)    DNA polymerase III chi subunit    DNA polymerase III chi subunit    DNA polymerase III chi subunit    DNA polymerase III chi subunit    Escherichia coli GO:  DNA binding    DNA-directed DNA polymerase activity    DNA replication    CHAIN: D SWISS-PROT/TREMBL: P28632    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-directed DNA polymerase    Transferase    EC: 2.7.7.7 SCOP: c.126.1.1 Alpha and beta proteins (a/b)    DNA polymerase III psi subunit    DNA polymerase III psi subunit    DNA polymerase III psi subunit    DNA polymerase III psi subunit    Escherichia coli GO:  3'-5' exonuclease activity    DNA-directed DNA polymerase activity    DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1em8_A_20 - HE => SUBCLASS : 1.1.2
1em8_A_121 - HE => SUBCLASS : 1.1.3
1em8_A_112 - EH => SUBCLASS : 2.1.1
1em8_A_39 - EH => SUBCLASS : 2.1.2
1em8_B_108 - HH => SUBCLASS : 1.2.1
1em8_B_108 - HH => SUBCLASS : 1.2.2

Loops in ArchDB95 clusters

1em8_B_102 - EH => SUBCLASS : 1.1.9
1em8_A_39 - EH => SUBCLASS : 2.1.3
1em8_A_112 - EH => SUBCLASS : 3.10.2
1em8_A_112 - EH => SUBCLASS : 4.5.1
1em8_B_108 - HH => SUBCLASS : 1.1.1
1em8_B_108 - HH => SUBCLASS : 1.2.1
1em8_A_121 - HE => SUBCLASS : 1.2.1
1em8_A_20 - HE => SUBCLASS : 1.2.3
1em8_A_20 - HE => SUBCLASS : 2.1.1

Loops in ArchDB-EC clusters

1em8_B_108 - HH => SUBCLASS : 1.2.1

Loops not clustered in ArchDB

1em8_B_68 - AR
1em8_A_80 - AR
1em8_B_68 - AR
1em8_A_80 - AR
1em8_A_2 - EH
1em8_B_39 - EH
1em8_A_95 - HA
1em8_A_67 - HA
1em8_A_95 - HA
1em8_A_67 - HA
1em8_B_86 - HA
1em8_B_86 - HA
1em8_B_52 - HE
1em8_A_46 - HE
1em8_B_115 - HH

1em8 A - percentage of sequence identity: 100
1em8 C - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0