PDB: 1ewq Compound: DNA mismatch repair protein muts Classification: REPLICATION/DNA Entry date in PDB: 2000-10-23 Resolution [Å]: 2.20 R-Factor: 0.227

CHAIN: A SWISS-PROT/TREMBL: Q56215    KEYWORD: 3D-structure    ATP-binding    DNA repair    DNA-binding    SCOP: a.113.1.1 All alpha proteins    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    Thermus aquaticus SCOP: c.37.1.12 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    ABC transporter ATPase domain-like    DNA repair protein MutS, the C-terminal domain    Thermus aquaticus SCOP: c.55.6.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    Thermus aquaticus SCOP: d.75.2.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    Thermus aquaticus GO:  cytoplasm    ATP binding    damaged DNA binding    DNA binding    DNA metabolism    DNA repair    mismatch repair    CHAIN: B SWISS-PROT/TREMBL: Q56215    KEYWORD: 3D-structure    ATP-binding    DNA repair    DNA-binding    SCOP: a.113.1.1 All alpha proteins    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    DNA repair protein MutS, domain III    Thermus aquaticus SCOP: c.37.1.12 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    ABC transporter ATPase domain-like    DNA repair protein MutS, the C-terminal domain    Thermus aquaticus SCOP: c.55.6.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    DNA repair protein MutS, domain II    Thermus aquaticus SCOP: d.75.2.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    DNA repair protein MutS, domain I    Thermus aquaticus GO:  cytoplasm    ATP binding    damaged DNA binding    DNA binding    DNA metabolism    DNA repair    mismatch repair

Image Source: PDB

Loops in ArchDB40 clusters

1ewq_A_670 - HE => SUBCLASS : 1.1.1
1ewq_A_670 - HE => SUBCLASS : 2.1.1
1ewq_A_163 - HE => SUBCLASS : 3.1.1
1ewq_A_15 - HE => SUBCLASS : 3.4.5
1ewq_A_15 - HE => SUBCLASS : 4.1.1
1ewq_A_645 - HE => SUBCLASS : 5.39.1
1ewq_A_61 - HA => SUBCLASS : 2.2.1
1ewq_A_465 - HA => SUBCLASS : 2.2.3
1ewq_A_708 - HA => SUBCLASS : 3.1.1
1ewq_A_439 - HA => SUBCLASS : 3.2.5
1ewq_A_143 - HA => SUBCLASS : 4.1.5
1ewq_A_39 - EH => SUBCLASS : 1.2.21
1ewq_A_72 - EH => SUBCLASS : 1.3.1
1ewq_A_154 - EH => SUBCLASS : 2.1.1
1ewq_A_154 - EH => SUBCLASS : 2.1.4
1ewq_A_690 - EH => SUBCLASS : 2.1.7
1ewq_A_546 - AR => SUBCLASS : 3.2.3
1ewq_A_182 - HH => SUBCLASS : 1.1.2
1ewq_A_182 - HH => SUBCLASS : 1.1.3
1ewq_A_299 - HH => SUBCLASS : 1.2.1
1ewq_A_299 - HH => SUBCLASS : 1.2.2
1ewq_A_316 - HH => SUBCLASS : 3.7.4
1ewq_A_332 - HH => SUBCLASS : 4.5.2
1ewq_A_282 - HH => SUBCLASS : 5.23.1

Loops in ArchDB95 clusters

1ewq_A_72 - EH => SUBCLASS : 1.2.1
1ewq_A_39 - EH => SUBCLASS : 1.3.21
1ewq_A_154 - EH => SUBCLASS : 2.1.1
1ewq_A_690 - EH => SUBCLASS : 2.1.12
1ewq_A_690 - EH => SUBCLASS : 2.3.2
1ewq_A_546 - AR => SUBCLASS : 3.1.11
1ewq_A_182 - HH => SUBCLASS : 1.1.1
1ewq_A_316 - HH => SUBCLASS : 3.8.5
1ewq_A_332 - HH => SUBCLASS : 4.1.3
1ewq_A_332 - HH => SUBCLASS : 4.4.1
1ewq_A_282 - HH => SUBCLASS : 5.40.1
1ewq_A_670 - HE => SUBCLASS : 1.1.1
1ewq_A_163 - HE => SUBCLASS : 3.1.1
1ewq_A_15 - HE => SUBCLASS : 3.4.3
1ewq_A_645 - HE => SUBCLASS : 5.1.2
1ewq_A_406 - HE => SUBCLASS : 5.66.1
1ewq_A_61 - HA => SUBCLASS : 2.2.1
1ewq_A_465 - HA => SUBCLASS : 2.2.3
1ewq_A_708 - HA => SUBCLASS : 3.1.1
1ewq_A_61 - HA => SUBCLASS : 3.1.1
1ewq_A_439 - HA => SUBCLASS : 3.3.1
1ewq_A_439 - HA => SUBCLASS : 3.3.2
1ewq_A_143 - HA => SUBCLASS : 4.1.7
1ewq_A_143 - HA => SUBCLASS : 4.1.8
1ewq_A_708 - HA => SUBCLASS : 7.9.1

Loops not clustered in ArchDB

1ewq_A_67 - AR
1ewq_A_110 - AR
1ewq_A_447 - AR
1ewq_A_570 - AR
1ewq_A_613 - AR
1ewq_A_657 - EH
1ewq_A_473 - EH
1ewq_A_242 - EH
1ewq_A_177 - EH
1ewq_A_621 - EH
1ewq_A_723 - EH
1ewq_A_578 - EH
1ewq_A_31 - HA
1ewq_A_552 - HA
1ewq_A_134 - HA
1ewq_A_92 - HA
1ewq_A_698 - HE
1ewq_A_589 - HE
1ewq_A_514 - HE
1ewq_A_215 - HE
1ewq_A_78 - HE
1ewq_A_44 - HE
1ewq_A_483 - HH
1ewq_A_376 - HH
1ewq_A_346 - HH
1ewq_A_272 - HH
1ewq_A_254 - HH
1ewq_A_188 - HH
1ewq_A_738 - HH

1ewq A - percentage of sequence identity: 100
1ewq B - percentage of sequence identity: 100
1ewr A - percentage of sequence identity: 100
1ewr B - percentage of sequence identity: 100
1fw6 A - percentage of sequence identity: 100
1fw6 B - percentage of sequence identity: 100
1nne A - percentage of sequence identity: 100
1nne B - percentage of sequence identity: 100