PDB: 1f60 Compound: elongation factor eef1a Classification: TRANSLATION Entry date in PDB: 2000-07-04 Resolution [Å]: 1.67 R-Factor: 0.189

CHAIN: A SWISS-PROT/TREMBL: P02994    KEYWORD: 3D-structure    Elongation factor    GTP-binding    Methylation    Multigene family    Protein biosynthesis    SCOP: b.43.3.1 All beta proteins    Reductase/isomerase/elongation factor common domain    Translation proteins    Elongation factors    Elongation factor eEF-1alpha, domain 2    Baker's yeast (Saccharomyces cerevisiae) SCOP: b.44.1.1 All beta proteins    Elongation factor/aminomethyltransferase common domain    EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain    EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain    Elongation factor eEF-1alpha, C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Elongation factor eEF-1alpha, N-terminal (G) domain    Baker's yeast (Saccharomyces cerevisiae) GO:  cytoplasm    GTP binding    translation elongation factor activity    protein biosynthesis    translational elongation    CHAIN: B SWISS-PROT/TREMBL: P32471    KEYWORD: 3D-structure    Acetylation    Elongation factor    Phosphorylation    Protein biosynthesis    SCOP: d.58.12.1 Alpha and beta proteins (a+b)    Ferredoxin-like    eEF-1beta-like    eEF-1beta-like    Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta    Baker's yeast (Saccharomyces cerevisiae) GO:  eukaryotic translation elongation factor 1 complex    translation elongation factor activity    translational elongation

Image Source: PDB

Loops in ArchDB40 clusters

1f60_B_1136 - HE => SUBCLASS : 5.13.1
1f60_A_212 - HA => SUBCLASS : 2.2.2
1f60_A_78 - HA => SUBCLASS : 2.2.3
1f60_A_283 - HA => SUBCLASS : 2.3.13
1f60_A_283 - HA => SUBCLASS : 2.3.20
1f60_A_358 - HA => SUBCLASS : 2.3.22
1f60_A_421 - HA => SUBCLASS : 2.4.13
1f60_A_245 - HA => SUBCLASS : 3.9.3
1f60_A_220 - EH => SUBCLASS : 2.1.1
1f60_A_220 - EH => SUBCLASS : 2.1.2
1f60_A_111 - EH => SUBCLASS : 2.1.4
1f60_A_85 - EH => SUBCLASS : 4.12.6
1f60_B_1120 - EH => SUBCLASS : 5.1.1
1f60_B_1120 - EH => SUBCLASS : 6.25.1
1f60_A_295 - AR => SUBCLASS : 6.7.1
1f60_A_305 - AR => SUBCLASS : 12.2.1
1f60_A_120 - HH => SUBCLASS : 4.17.2

Loops in ArchDB95 clusters

1f60_A_220 - EH => SUBCLASS : 2.1.1
1f60_A_111 - EH => SUBCLASS : 2.1.2
1f60_B_1120 - EH => SUBCLASS : 6.16.2
1f60_A_295 - AR => SUBCLASS : 6.18.1
1f60_A_305 - AR => SUBCLASS : 12.5.1
1f60_A_120 - HH => SUBCLASS : 4.27.1
1f60_B_1181 - HE => SUBCLASS : 4.6.6
1f60_B_1181 - HE => SUBCLASS : 4.52.2
1f60_B_1136 - HE => SUBCLASS : 5.17.1
1f60_A_212 - HA => SUBCLASS : 2.2.2
1f60_A_78 - HA => SUBCLASS : 2.2.3
1f60_A_283 - HA => SUBCLASS : 2.3.8
1f60_A_358 - HA => SUBCLASS : 2.3.21
1f60_A_245 - HA => SUBCLASS : 3.13.3

Loops not clustered in ArchDB

1f60_A_188 - AR
1f60_A_258 - AR
1f60_A_323 - AR
1f60_A_337 - AR
1f60_A_384 - AR
1f60_A_397 - AR
1f60_B_1165 - EH
1f60_A_147 - EH
1f60_A_6 - EH
1f60_B_1151 - HA
1f60_A_364 - HA
1f60_A_275 - HA
1f60_A_226 - HE
1f60_A_162 - HE
1f60_A_132 - HE
1f60_A_98 - HE
1f60_A_56 - HE
1f60_A_20 - HH
1f60_A_36 - HH

1g7c B - percentage of sequence identity: 100
1ije B - percentage of sequence identity: 100
1ijf B - percentage of sequence identity: 100