PDB: 1f86 Compound: transthyretin thr119met variant Classification: TRANSPORT PROTEIN Entry date in PDB: 2001-06-29 Resolution [Å]: 1.10 R-Factor: 0.140

CHAIN: A SWISS-PROT/TREMBL: P02766    KEYWORD: 3D-structure    Amyloid    Disease mutation    Plasma    Polymorphism    Polyneuropathy    Retinol-binding    Signal    Thyroid hormone    Transport    Vitamin A    SCOP: b.3.4.1 All beta proteins    Prealbumin-like    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Human (Homo sapiens) GO:  carrier activity    steroid binding    transport    CHAIN: B SWISS-PROT/TREMBL: P02766    KEYWORD: 3D-structure    Amyloid    Disease mutation    Plasma    Polymorphism    Polyneuropathy    Retinol-binding    Signal    Thyroid hormone    Transport    Vitamin A    SCOP: b.3.4.1 All beta proteins    Prealbumin-like    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Human (Homo sapiens) GO:  carrier activity    steroid binding    transport

Image Source: PDB

Loops in ArchDB40 clusters

1f86_A_104 - HA => SUBCLASS : 2.2.1
1f86_A_12 - HA => SUBCLASS : 4.1.1
1f86_A_29 - HA => SUBCLASS : 4.2.2
1f86_A_67 - EH => SUBCLASS : 1.1.15
1f86_A_67 - EH => SUBCLASS : 1.1.49
1f86_A_41 - AR => SUBCLASS : 5.7.1

Loops in ArchDB95 clusters

1f86_A_67 - EH => SUBCLASS : 1.1.18
1f86_A_23 - AR => SUBCLASS : 4.2.6
1f86_A_41 - AR => SUBCLASS : 5.8.1
1f86_A_75 - HE => SUBCLASS : 7.19.1
1f86_A_104 - HA => SUBCLASS : 2.2.1
1f86_A_12 - HA => SUBCLASS : 4.1.1
1f86_A_29 - HA => SUBCLASS : 5.1.1
1f86_A_29 - HA => SUBCLASS : 5.1.2

Loops not clustered in ArchDB

1f86_A_54 - AR
1f86_A_91 - AR

1bm7 A - percentage of sequence identity: 99
1bm7 B - percentage of sequence identity: 99
1bmz A - percentage of sequence identity: 99
1bmz B - percentage of sequence identity: 99
1bz8 A - percentage of sequence identity: 99
1bz8 B - percentage of sequence identity: 99
1bzd A - percentage of sequence identity: 99
1bzd B - percentage of sequence identity: 99
1bze A - percentage of sequence identity: 100
1bze B - percentage of sequence identity: 100
1dvq A - percentage of sequence identity: 98
1dvq B - percentage of sequence identity: 98
1dvs A - percentage of sequence identity: 98
1dvs B - percentage of sequence identity: 98
1dvt A - percentage of sequence identity: 98
1dvt B - percentage of sequence identity: 98
1dvu A - percentage of sequence identity: 98
1dvu B - percentage of sequence identity: 98
1dvx A - percentage of sequence identity: 98
1dvx B - percentage of sequence identity: 98
1dvy A - percentage of sequence identity: 98
1dvy B - percentage of sequence identity: 98
1dvz A - percentage of sequence identity: 98
1dvz B - percentage of sequence identity: 98
1e3f A - percentage of sequence identity: 99
1e3f B - percentage of sequence identity: 99
1e4h A - percentage of sequence identity: 99
1e4h B - percentage of sequence identity: 99
1e5a A - percentage of sequence identity: 99
1e5a B - percentage of sequence identity: 99
1eta 1 - percentage of sequence identity: 99
1eta 2 - percentage of sequence identity: 99
1etb 1 - percentage of sequence identity: 98
1etb 2 - percentage of sequence identity: 98
1f41 A - percentage of sequence identity: 99
1f41 B - percentage of sequence identity: 99
1f86 A - percentage of sequence identity: 100
1f86 B - percentage of sequence identity: 100
1fh2 A - percentage of sequence identity: 100
1fh2 B - percentage of sequence identity: 100
1fhn A - percentage of sequence identity: 100
1fhn B - percentage of sequence identity: 100
1g1o A - percentage of sequence identity: 96
1g1o B - percentage of sequence identity: 96
1g1o C - percentage of sequence identity: 96
1g1o D - percentage of sequence identity: 96
1gke A - percentage of sequence identity: 83
1gke B - percentage of sequence identity: 83
1gke C - percentage of sequence identity: 83
1gke D - percentage of sequence identity: 83
1gko A - percentage of sequence identity: 97
1gko B - percentage of sequence identity: 97
1gko C - percentage of sequence identity: 97
1gko D - percentage of sequence identity: 97
1ict A - percentage of sequence identity: 99
1ict B - percentage of sequence identity: 99
1ict C - percentage of sequence identity: 99
1ict D - percentage of sequence identity: 99
1ict E - percentage of sequence identity: 99
1ict F - percentage of sequence identity: 99
1ict G - percentage of sequence identity: 99
1ict H - percentage of sequence identity: 99
1ie4 A - percentage of sequence identity: 83
1ie4 B - percentage of sequence identity: 83
1ie4 C - percentage of sequence identity: 83
1ie4 D - percentage of sequence identity: 83
1iii A - percentage of sequence identity: 98
1iii B - percentage of sequence identity: 98
1iik A - percentage of sequence identity: 98
1iik B - percentage of sequence identity: 98
1ijn A - percentage of sequence identity: 98
1ijn B - percentage of sequence identity: 98
1kgi A - percentage of sequence identity: 83
1kgi B - percentage of sequence identity: 83
1kgi C - percentage of sequence identity: 83
1kgi D - percentage of sequence identity: 83
1kgj A - percentage of sequence identity: 83
1kgj B - percentage of sequence identity: 83
1kgj C - percentage of sequence identity: 83
1kgj D - percentage of sequence identity: 83
1qab A - percentage of sequence identity: 98
1qab B - percentage of sequence identity: 98
1qab C - percentage of sequence identity: 98
1qab D - percentage of sequence identity: 98
1qwh A - percentage of sequence identity: 99
1qwh B - percentage of sequence identity: 99
1rlb A - percentage of sequence identity: 98
1rlb B - percentage of sequence identity: 98
1rlb C - percentage of sequence identity: 98
1rlb D - percentage of sequence identity: 98
1sok A - percentage of sequence identity: 97
1sok B - percentage of sequence identity: 97
1soq A - percentage of sequence identity: 97
1soq B - percentage of sequence identity: 97
1soq C - percentage of sequence identity: 97
1soq D - percentage of sequence identity: 97
1tfp A - percentage of sequence identity: 77
1tfp B - percentage of sequence identity: 77
1tha A - percentage of sequence identity: 98
1tha B - percentage of sequence identity: 98
1thc A - percentage of sequence identity: 98
1thc B - percentage of sequence identity: 98
1tlm A - percentage of sequence identity: 98
1tlm B - percentage of sequence identity: 98
1tsh A - percentage of sequence identity: 98
1tsh B - percentage of sequence identity: 98
1tt6 A - percentage of sequence identity: 99
1tt6 B - percentage of sequence identity: 99
1tta A - percentage of sequence identity: 99
1tta B - percentage of sequence identity: 99
1ttb A - percentage of sequence identity: 98
1ttb B - percentage of sequence identity: 98
1ttc A - percentage of sequence identity: 98
1ttc B - percentage of sequence identity: 98
1ttr A - percentage of sequence identity: 98
1ttr B - percentage of sequence identity: 98
1tyr A - percentage of sequence identity: 99
1tyr B - percentage of sequence identity: 99
1tz8 A - percentage of sequence identity: 99
1tz8 B - percentage of sequence identity: 99
1tz8 C - percentage of sequence identity: 99
1tz8 D - percentage of sequence identity: 99
1u21 A - percentage of sequence identity: 99
1u21 B - percentage of sequence identity: 99
1x7s A - percentage of sequence identity: 98
1x7s B - percentage of sequence identity: 98
1x7t A - percentage of sequence identity: 98
1x7t B - percentage of sequence identity: 98
1y1d A - percentage of sequence identity: 99
1y1d B - percentage of sequence identity: 99
1z7j A - percentage of sequence identity: 99
1z7j B - percentage of sequence identity: 99
1zcr A - percentage of sequence identity: 99
1zcr B - percentage of sequence identity: 99
1zd6 A - percentage of sequence identity: 99
1zd6 B - percentage of sequence identity: 99
2b77 A - percentage of sequence identity: 99
2b77 B - percentage of sequence identity: 99
2b9a A - percentage of sequence identity: 99
2b9a B - percentage of sequence identity: 99
2f7i A - percentage of sequence identity: 99
2f7i B - percentage of sequence identity: 99
2f8i A - percentage of sequence identity: 99
2f8i B - percentage of sequence identity: 99
2fbr A - percentage of sequence identity: 99
2fbr B - percentage of sequence identity: 99
2pab A - percentage of sequence identity: 98
2pab B - percentage of sequence identity: 98
2rox A - percentage of sequence identity: 99
2rox B - percentage of sequence identity: 99
2roy A - percentage of sequence identity: 99
2roy B - percentage of sequence identity: 99
2trh A - percentage of sequence identity: 99
2trh B - percentage of sequence identity: 99
2try A - percentage of sequence identity: 98
2try B - percentage of sequence identity: 98
5ttr A - percentage of sequence identity: 98
5ttr B - percentage of sequence identity: 98
5ttr C - percentage of sequence identity: 98
5ttr D - percentage of sequence identity: 98
5ttr E - percentage of sequence identity: 98
5ttr F - percentage of sequence identity: 98
5ttr G - percentage of sequence identity: 98
5ttr H - percentage of sequence identity: 98