PDB: 1gj7 Compound: urokinase-type plasminogen activator Classification: BLOOD CLOTTING, HYDROLASE Entry date in PDB: 2002-04-27 Resolution [Å]: 1.50 R-Factor: 0.201

CHAIN: A SWISS-PROT/TREMBL: P00749    KEYWORD: 3D-structure    EGF-like domain    Fibrinolysis    Glycoprotein    Hydrolase    Kringle    Pharmaceutical    Plasminogen activation    Polymorphism    Serine protease    Signal    Zymogen    EC: 3.4.21.73 SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Urokinase-type plasminogen activator (LMW U-PA), catalytic domain    Human (Homo sapiens) GO:  chymotrypsin activity    trypsin activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P00749    KEYWORD: 3D-structure    EGF-like domain    Fibrinolysis    Glycoprotein    Hydrolase    Kringle    Pharmaceutical    Plasminogen activation    Polymorphism    Serine protease    Signal    Zymogen    EC: 3.4.21.73 SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Urokinase-type plasminogen activator (LMW U-PA), catalytic domain    Human (Homo sapiens) GO:  chymotrypsin activity    trypsin activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1gj7_B_198 - HA => SUBCLASS : 2.1.2
1gj7_B_206 - HA => SUBCLASS : 8.7.1
1gj7_B_226 - EH => SUBCLASS : 0.1.4
1gj7_B_156 - EH => SUBCLASS : 1.1.14

Loops in ArchDB95 clusters

1gj7_B_226 - EH => SUBCLASS : 0.1.2
1gj7_B_156 - EH => SUBCLASS : 1.1.8
1gj7_B_81 - AR => SUBCLASS : 3.6.10
1gj7_B_20 - AR => SUBCLASS : 6.10.1
1gj7_B_51 - AR => SUBCLASS : 12.6.1
1gj7_B_198 - HA => SUBCLASS : 2.1.3
1gj7_B_198 - HA => SUBCLASS : 2.1.4
1gj7_B_198 - HA => SUBCLASS : 2.1.9
1gj7_B_95 - HA => SUBCLASS : 3.33.1
1gj7_B_30 - HA => SUBCLASS : 4.27.1
1gj7_B_206 - HA => SUBCLASS : 10.1.1

Loops in ArchDB-EC clusters

1gj7_B_165 - HE => SUBCLASS : 12.5.1

Loops not clustered in ArchDB

1gj7_B_51 - AR
1gj7_B_99 - AR
1gj7_B_104 - AR
1gj7_B_20 - AR
1gj7_B_180 - AR
1gj7_B_180 - AR
1gj7_B_104 - AR
1gj7_B_99 - AR
1gj7_B_81 - AR
1gj7_B_135 - HA
1gj7_B_198 - HA
1gj7_B_95 - HA
1gj7_B_64 - HA
1gj7_B_38 - HA
1gj7_B_38 - HA
1gj7_B_30 - HA
1gj7_B_135 - HA
1gj7_B_64 - HA
1gj7_B_206 - HA

1c5w B - percentage of sequence identity: 100
1c5x B - percentage of sequence identity: 100
1c5y B - percentage of sequence identity: 100
1c5z B - percentage of sequence identity: 100
1ejn A - percentage of sequence identity: 98
1f5k U - percentage of sequence identity: 98
1f5l A - percentage of sequence identity: 98
1f92 A - percentage of sequence identity: 98
1fv9 A - percentage of sequence identity: 99
1gi7 B - percentage of sequence identity: 100
1gi8 B - percentage of sequence identity: 100
1gi9 B - percentage of sequence identity: 100
1gj8 B - percentage of sequence identity: 100
1gj9 B - percentage of sequence identity: 100
1gja B - percentage of sequence identity: 100
1gjb B - percentage of sequence identity: 100
1gjc B - percentage of sequence identity: 100
1gjd B - percentage of sequence identity: 100
1lmw B - percentage of sequence identity: 99
1lmw D - percentage of sequence identity: 99
1o3p B - percentage of sequence identity: 100
1o5a B - percentage of sequence identity: 99
1o5b B - percentage of sequence identity: 99
1o5c B - percentage of sequence identity: 99
1owd A - percentage of sequence identity: 99
1owe A - percentage of sequence identity: 99
1owh A - percentage of sequence identity: 99
1owi A - percentage of sequence identity: 99
1owj A - percentage of sequence identity: 99
1owk A - percentage of sequence identity: 99
1sc8 U - percentage of sequence identity: 98
1sqa A - percentage of sequence identity: 99
1sqo A - percentage of sequence identity: 99
1sqt A - percentage of sequence identity: 99
1u6q A - percentage of sequence identity: 99
1vj9 U - percentage of sequence identity: 98
1vja U - percentage of sequence identity: 98
null nu - percentage of sequence identity: 0