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Information on 1gkm
PDB: 1gkm
Compound: histidine ammonia-lyase
Classification: LYASE
Entry date in PDB: 2002-04-05
Resolution [Å]: 1.00
R-Factor: 0.119


CHAIN: A
SWISS-PROT/TREMBL: P21310
   KEYWORD: 3D-structure    Histidine metabolism    Lyase   
EC: 4.3.1.3
SCOP: a.127.1.2 All alpha proteins    L-aspartase-like    L-aspartase-like    Histidine ammonia-lyase (HAL)    Histidine ammonia-lyase (HAL)    Pseudomonas putida
GO:  cytoplasm    ammonia ligase activity    histidine ammonia-lyase activity    biosynthesis    histidine catabolism   
1gkm Image
Image Source: PDB

Stored Loops of 1gkm

Loops in ArchDB40 clusters

1gkm_A_116 - HE => SUBCLASS : 1.3.3
1gkm_A_12 - HE => SUBCLASS : 2.6.9
1gkm_A_87 - EH => SUBCLASS : 1.1.4
1gkm_A_331 - HH => SUBCLASS : 1.2.9

Loops in ArchDB95 clusters

1gkm_A_24 - EH => SUBCLASS : 1.1.15
1gkm_A_87 - EH => SUBCLASS : 2.2.1
1gkm_A_331 - HH => SUBCLASS : 1.1.1
1gkm_A_237 - HH => SUBCLASS : 2.2.15
1gkm_A_116 - HE => SUBCLASS : 1.2.1
1gkm_A_12 - HE => SUBCLASS : 3.12.2

Loops in ArchDB-EC clusters

1gkm_A_331 - HH => SUBCLASS : 1.1.1

Loops not clustered in ArchDB

1gkm_A_130 - AR
1gkm_A_130 - AR
1gkm_A_2 - EH
1gkm_A_321 - EH
1gkm_A_166 - EH
1gkm_A_135 - EH
1gkm_A_160 - HA
1gkm_A_314 - HA
1gkm_A_160 - HA
1gkm_A_314 - HA
1gkm_A_69 - HE
1gkm_A_145 - HE
1gkm_A_284 - HE
1gkm_A_188 - HH
1gkm_A_32 - HH
1gkm_A_93 - HH
1gkm_A_458 - HH
1gkm_A_419 - HH
1gkm_A_381 - HH
1gkm_A_361 - HH
1gkm_A_279 - HH
1gkm_A_264 - HH
1gkm_A_170 - HH
1gkm_A_197 - HH
1gkm_A_246 - HH

Homologous structures to 1gkm classified in ArchDB

1b8f A - percentage of sequence identity: 100
1eb4 A - percentage of sequence identity: 99
1gk2 A - percentage of sequence identity: 99
1gk2 B - percentage of sequence identity: 99
1gk2 C - percentage of sequence identity: 99
1gk2 D - percentage of sequence identity: 99
1gk3 A - percentage of sequence identity: 99
1gkj A - percentage of sequence identity: 99