PDB: 1gnu Compound: gabarap Classification: TRANSPORT Entry date in PDB: 2001-12-03 Resolution [Å]: 1.75 R-Factor: 0.203

CHAIN: A SWISS-PROT/TREMBL: O95166    KEYWORD: 3D-structure    Golgi stack    Microtubule    Protein transport    Transport    SCOP: d.15.1.3 Alpha and beta proteins (a+b)    beta-Grasp (ubiquitin-like)    Ubiquitin-like    GABARAP-like    GABA(A) receptor associated protein GABARAP    Human (Homo sapiens) GO:

Image Source: PDB

Loops in ArchDB40 clusters

1gnu_A_11 - HE => SUBCLASS : 3.4.4
1gnu_A_11 - HE => SUBCLASS : 4.1.1
1gnu_A_91 - HE => SUBCLASS : 5.37.1
1gnu_A_57 - HE => SUBCLASS : 7.6.1
1gnu_A_48 - EH => SUBCLASS : 5.1.1
1gnu_A_4 - HH => SUBCLASS : 2.1.3

Loops in ArchDB95 clusters

1gnu_A_48 - EH => SUBCLASS : 4.2.2
1gnu_A_4 - HH => SUBCLASS : 2.3.1
1gnu_A_11 - HE => SUBCLASS : 4.1.2
1gnu_A_91 - HE => SUBCLASS : 5.29.1
1gnu_A_57 - HE => SUBCLASS : 6.5.1

Loops not clustered in ArchDB

1gnu_A_77 - EH
1gnu_A_28 - HA

1kjt A - percentage of sequence identity: 100
1klv A - percentage of sequence identity: 100
1km7 A - percentage of sequence identity: 100
1kot A - percentage of sequence identity: 100