Information on 1gtk |
PDB: 1gtk Compound: porphobilinogen deaminase Classification: LYASE Entry date in PDB: 2003-01-16 Resolution [Å]: 1.66 R-Factor: 0.200 |
CHAIN: A SWISS-PROT/TREMBL:
P06983
KEYWORD: 3D-structure Complete proteome Porphyrin biosynthesis Transferase EC: 2.5.1.61 SCOP: c.94.1.1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain Escherichia coli SCOP: d.50.2.1 Alpha and beta proteins (a+b) dsRBD-like Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Escherichia coli GO: hydroxymethylbilane synthase activity porphyrin biosynthesis |
Image Source: PDB |
Stored Loops of 1gtk |
Loops in ArchDB95 clusters
1gtk_A_271 - EH => SUBCLASS : 1.1.53
1gtk_A_124 - EH => SUBCLASS : 2.1.3
1gtk_A_201 - EH => SUBCLASS : 3.2.3
1gtk_A_201 - EH => SUBCLASS : 3.9.1
1gtk_A_106 - AR => SUBCLASS : 13.8.1
1gtk_A_210 - HH => SUBCLASS : 2.4.5
1gtk_A_14 - HE => SUBCLASS : 4.1.1
1gtk_A_130 - HE => SUBCLASS : 4.1.2
1gtk_A_63 - HE => SUBCLASS : 4.2.1
1gtk_A_152 - HE => SUBCLASS : 4.4.3
1gtk_A_171 - HE => SUBCLASS : 7.5.1
1gtk_A_256 - HA => SUBCLASS : 5.2.2
Loops in ArchDB-EC clusters
1gtk_A_210 - HH => SUBCLASS : 2.1.31
Loops not clustered in ArchDB
1gtk_A_185 - AR
1gtk_A_185 - AR
1gtk_A_106 - AR
1gtk_A_93 - AR
1gtk_A_77 - AR
1gtk_A_77 - AR
1gtk_A_93 - AR
1gtk_A_5 - EH
1gtk_A_166 - EH
1gtk_A_144 - EH
1gtk_A_35 - EH
1gtk_A_246 - HA
1gtk_A_246 - HA
1gtk_A_256 - HA
1gtk_A_222 - HE
1gtk_A_283 - HH
Homologous structures to 1gtk classified in ArchDB |
1ah5 - - percentage of sequence identity: 100
1ypn - - percentage of sequence identity: 99
2ypn A - percentage of sequence identity: 100