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Information on 1gud
PDB: 1gud
Compound: d-allose-binding periplasmic protein
Classification: PERIPLASMIC BINDING PROTEIN
Entry date in PDB: 2003-03-06
Resolution [Å]: 1.70
R-Factor: 0.173


CHAIN: A
SWISS-PROT/TREMBL: P39265
   KEYWORD: 3D-structure    Complete proteome    Periplasmic    Signal    Sugar transport    Transport   
SCOP: c.93.1.1 Alpha and beta proteins (a/b)    Periplasmic binding protein-like I    Periplasmic binding protein-like I    L-arabinose binding protein-like    D-allose-binding protein    Escherichia coli
GO:  


CHAIN: B
SWISS-PROT/TREMBL: P39265
   KEYWORD: 3D-structure    Complete proteome    Periplasmic    Signal    Sugar transport    Transport   
SCOP: c.93.1.1 Alpha and beta proteins (a/b)    Periplasmic binding protein-like I    Periplasmic binding protein-like I    L-arabinose binding protein-like    D-allose-binding protein    Escherichia coli
GO:  
1gud Image
Image Source: PDB

Stored Loops of 1gud

Loops in ArchDB40 clusters

1gud_A_74 - HE => SUBCLASS : 1.1.1
1gud_A_14 - HE => SUBCLASS : 1.1.2
1gud_A_146 - HE => SUBCLASS : 3.3.1
1gud_A_146 - HE => SUBCLASS : 3.4.1
1gud_A_146 - HE => SUBCLASS : 3.4.2
1gud_A_230 - HE => SUBCLASS : 4.2.1
1gud_A_96 - HE => SUBCLASS : 5.3.1
1gud_A_96 - HE => SUBCLASS : 5.3.3
1gud_A_177 - HE => SUBCLASS : 5.10.1
1gud_A_177 - HE => SUBCLASS : 5.10.2
1gud_A_196 - EH => SUBCLASS : 2.1.1
1gud_A_243 - EH => SUBCLASS : 2.2.3
1gud_A_60 - EH => SUBCLASS : 3.7.6
1gud_A_3 - EH => SUBCLASS : 4.1.1
1gud_A_165 - EH => SUBCLASS : 4.30.1
1gud_A_134 - EH => SUBCLASS : 5.55.1

Loops in ArchDB95 clusters

1gud_A_196 - EH => SUBCLASS : 2.1.1
1gud_A_243 - EH => SUBCLASS : 2.2.2
1gud_A_60 - EH => SUBCLASS : 3.3.7
1gud_A_3 - EH => SUBCLASS : 4.1.1
1gud_A_165 - EH => SUBCLASS : 4.27.1
1gud_A_74 - HE => SUBCLASS : 1.1.1
1gud_A_14 - HE => SUBCLASS : 2.1.2
1gud_A_14 - HE => SUBCLASS : 3.2.1
1gud_A_14 - HE => SUBCLASS : 3.2.2
1gud_A_146 - HE => SUBCLASS : 3.4.1
1gud_A_146 - HE => SUBCLASS : 3.6.2
1gud_A_230 - HE => SUBCLASS : 4.2.1
1gud_A_96 - HE => SUBCLASS : 5.3.1
1gud_A_177 - HE => SUBCLASS : 5.9.1

Loops not clustered in ArchDB

1gud_A_277 - AR
1gud_A_34 - EH
1gud_A_86 - EH
1gud_A_108 - EH
1gud_A_222 - EH
1gud_A_45 - HE
1gud_A_114 - HE
1gud_A_202 - HE
1gud_A_249 - HE

Homologous structures to 1gud classified in ArchDB

1gub A - percentage of sequence identity: 100
1gud A - percentage of sequence identity: 100
1gud B - percentage of sequence identity: 100
1rpj A - percentage of sequence identity: 100