PDB: 1gyc Compound: laccase 2 Classification: OXIDOREDUCTASE Entry date in PDB: 2002-08-22 Resolution [Å]: 1.90 R-Factor: 0.159

CHAIN: A SWISS-PROT/TREMBL: Q12718    KEYWORD: 3D-structure    Copper    Glycoprotein    Lignin degradation    Metal-binding    Multigene family    Oxidoreductase    Repeat    Signal    EC: 1.10.3.2 SCOP: b.6.1.3 All beta proteins    Cupredoxin-like    Cupredoxins    Multidomain cupredoxins    Laccase    Trametes versicolor, laccase 2 SCOP: b.6.1.3 All beta proteins    Cupredoxin-like    Cupredoxins    Multidomain cupredoxins    Laccase    Trametes versicolor, laccase 2 SCOP: b.6.1.3 All beta proteins    Cupredoxin-like    Cupredoxins    Multidomain cupredoxins    Laccase    Trametes versicolor, laccase 2 GO:  copper ion binding    oxidoreductase activity

Image Source: PDB

Loops in ArchDB95 clusters

1gyc_A_464 - EH => SUBCLASS : 1.4.2
1gyc_A_447 - EH => SUBCLASS : 2.1.1
1gyc_A_447 - EH => SUBCLASS : 2.1.4
1gyc_A_337 - EH => SUBCLASS : 11.13.1
1gyc_A_371 - AR => SUBCLASS : 1.1.1
1gyc_A_236 - AR => SUBCLASS : 1.1.2
1gyc_A_187 - AR => SUBCLASS : 1.1.2
1gyc_A_226 - AR => SUBCLASS : 1.2.7
1gyc_A_209 - AR => SUBCLASS : 3.5.1
1gyc_A_187 - AR => SUBCLASS : 4.2.3
1gyc_A_436 - AR => SUBCLASS : 4.3.1
1gyc_A_243 - AR => SUBCLASS : 5.37.1
1gyc_A_195 - AR => SUBCLASS : 6.1.1
1gyc_A_22 - AR => SUBCLASS : 8.30.1
1gyc_A_121 - AR => SUBCLASS : 16.3.1
1gyc_A_63 - AR => SUBCLASS : 24.2.1
1gyc_A_471 - HH => SUBCLASS : 4.6.1
1gyc_A_456 - HE => SUBCLASS : 2.5.4
1gyc_A_351 - HE => SUBCLASS : 13.2.1
1gyc_A_330 - HA => SUBCLASS : 3.6.1
1gyc_A_5 - HA => SUBCLASS : 5.45.1
1gyc_A_104 - HA => SUBCLASS : 10.6.1
1gyc_A_404 - HA => SUBCLASS : 13.3.1

Loops in ArchDB-EC clusters

1gyc_A_456 - HE => SUBCLASS : 2.6.4

Loops not clustered in ArchDB

1gyc_A_425 - AR
1gyc_A_121 - AR
1gyc_A_168 - AR
1gyc_A_187 - AR
1gyc_A_195 - AR
1gyc_A_209 - AR
1gyc_A_226 - AR
1gyc_A_236 - AR
1gyc_A_243 - AR
1gyc_A_436 - AR
1gyc_A_276 - AR
1gyc_A_324 - AR
1gyc_A_371 - AR
1gyc_A_379 - AR
1gyc_A_396 - AR
1gyc_A_422 - AR
1gyc_A_91 - AR
1gyc_A_63 - AR
1gyc_A_43 - AR
1gyc_A_36 - AR
1gyc_A_43 - AR
1gyc_A_91 - AR
1gyc_A_168 - AR
1gyc_A_396 - AR
1gyc_A_276 - AR
1gyc_A_324 - AR
1gyc_A_379 - AR
1gyc_A_22 - AR
1gyc_A_422 - AR
1gyc_A_425 - AR
1gyc_A_36 - AR
1gyc_A_104 - HA
1gyc_A_404 - HA
1gyc_A_145 - HA
1gyc_A_145 - HA
1gyc_A_218 - HA
1gyc_A_330 - HA
1gyc_A_5 - HA
1gyc_A_256 - HA
1gyc_A_218 - HA
1gyc_A_256 - HA

1kya B - percentage of sequence identity: 80
1kya C - percentage of sequence identity: 80
1kya D - percentage of sequence identity: 80
1v10 A - percentage of sequence identity: 62