PDB: 1h2s Compound: sensory rhodopsin ii Classification: MENBRANE PROTEIN COMPLEX Entry date in PDB: 2002-10-10 Resolution [Å]: 1.93 R-Factor: 0.226

CHAIN: A SWISS-PROT/TREMBL: P42196    KEYWORD: 3D-structure    Photoreceptor    Retinal protein    Transmembrane    3D-structure    Photoreceptor    Retinal protein    Transmembrane    SCOP: f.13.1.1 Membrane and cell surface proteins and peptides    Family A G protein-coupled receptor-like    Family A G protein-coupled receptor-like    Bacteriorhodopsin-like    Sensory rhodopsin II    Archaeon Natronobacterium pharaonis GO:  membrane    ion channel activity    ion transport    CHAIN: B SWISS-PROT/TREMBL: P42259    KEYWORD: 3D-structure    Chemotaxis    Methylation    Photoreceptor    Repeat    Transducer    Transmembrane    SCOP: f.13.1.1 Membrane and cell surface proteins and peptides    Family A G protein-coupled receptor-like    Family A G protein-coupled receptor-like    Bacteriorhodopsin-like    Sensory rhodopsin II    Archaeon Natronobacterium pharaonis GO:  membrane    signal transducer activity    chemotaxis    signal transduction

Image Source: PDB

Loops in ArchDB40 clusters

1h2s_A_122 - HH => SUBCLASS : 1.10.1
1h2s_A_144 - HH => SUBCLASS : 2.1.1
1h2s_A_144 - HH => SUBCLASS : 2.1.20
1h2s_B_24 - HH => SUBCLASS : 2.2.2
1h2s_A_95 - HH => SUBCLASS : 2.5.1
1h2s_A_70 - HH => SUBCLASS : 3.2.2
1h2s_A_70 - HH => SUBCLASS : 3.3.1

Loops in ArchDB95 clusters

1h2s_A_122 - HH => SUBCLASS : 1.7.1
1h2s_A_144 - HH => SUBCLASS : 2.1.1
1h2s_B_24 - HH => SUBCLASS : 2.2.2
1h2s_A_95 - HH => SUBCLASS : 2.4.1
1h2s_A_70 - HH => SUBCLASS : 3.1.2
1h2s_A_95 - HH => SUBCLASS : 3.35.1

Loops not clustered in ArchDB

1h2s_A_68 - EH
1h2s_A_60 - HA
1h2s_A_34 - HE
1h2s_A_4 - HH
1h2s_A_154 - HH
1h2s_A_174 - HH

1gu8 A - percentage of sequence identity: 100
1gue A - percentage of sequence identity: 100
1h68 A - percentage of sequence identity: 100
1jgj A - percentage of sequence identity: 98
null nu - percentage of sequence identity: 0