ArchDB - Biological DataBase of Protein Loops

Information on 1hrh

PDB: 1hrh
Compound: Ribonuclease h domain of HIV-1 reverse transcripta
Classification: HYDROLASE(ENDORIBONUCLEASE)
Entry date in PDB: 1992-01-15
Resolution [Å]: 2.40
R-Factor: 0.200

CHAIN: A

SWISS-PROT/TREMBL: P03366
   KEYWORD: 3D-structure    AIDS    Aspartyl protease    Endonuclease    Hydrolase    Metal-binding    Nuclease    Polyprotein    RNA-directed DNA polymerase    Transferase    Zinc    Zinc-finger
EC: 2.7.7.49
SCOP: c.55.3.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    Ribonuclease H    HIV RNase H (Domain of reverse transcriptase)    Human immunodeficiency virus type 1
GO:  aspartic-type endopeptidase activity    DNA binding    integrase activity    nucleic acid binding    ribonuclease H activity    RNA binding    RNA-directed DNA polymerase activity    zinc ion binding    DNA integration    DNA recombination    proteolysis and peptidolysis    RNA-dependent DNA replication

CHAIN: B

Image Source: PDB

Stored Loops of 1hrh

Loops in ArchDB95 clusters

1hrh_A_464 - EH => SUBCLASS : 5.9.1
1hrh_A_452 - HA => SUBCLASS : 4.3.4
1hrh_A_439 - HA => SUBCLASS : 5.12.1

Loops not clustered in ArchDB

1hrh_A_492 - EH
1hrh_A_530 - EH
1hrh_A_474 - HE
1hrh_A_516 - HE
1hrh_A_500 - HH

Homologous structures to 1hrh classified in ArchDB

1bqm A - percentage of sequence identity: 100
1bqn A - percentage of sequence identity: 99
1c0t A - percentage of sequence identity: 96
1c0u A - percentage of sequence identity: 96
1c1b A - percentage of sequence identity: 96
1c1c A - percentage of sequence identity: 96
1dlo A - percentage of sequence identity: 100
1dtq A - percentage of sequence identity: 96
1dtt A - percentage of sequence identity: 96
1eet A - percentage of sequence identity: 99
1ep4 A - percentage of sequence identity: 96
1fk9 A - percentage of sequence identity: 96
1fko A - percentage of sequence identity: 96
1fkp A - percentage of sequence identity: 96
1hmv A - percentage of sequence identity: 100
1hmv C - percentage of sequence identity: 100
1hmv E - percentage of sequence identity: 100
1hmv G - percentage of sequence identity: 100
1hni A - percentage of sequence identity: 100
1hnv A - percentage of sequence identity: 100
1hpz A - percentage of sequence identity: 100
1hqe A - percentage of sequence identity: 100
1hqu A - percentage of sequence identity: 100
1hrh A - percentage of sequence identity: 100
1hrh B - percentage of sequence identity: 100
1hvu A - percentage of sequence identity: 100
1hvu D - percentage of sequence identity: 100
1hvu G - percentage of sequence identity: 100
1hvu J - percentage of sequence identity: 100
1hys A - percentage of sequence identity: 100
1ikv A - percentage of sequence identity: 99
1ikw A - percentage of sequence identity: 99
1ikx A - percentage of sequence identity: 99
1iky A - percentage of sequence identity: 99
1j5o A - percentage of sequence identity: 100
1jkh A - percentage of sequence identity: 96
1jla A - percentage of sequence identity: 96
1jlb A - percentage of sequence identity: 96
1jlc A - percentage of sequence identity: 96
1jle A - percentage of sequence identity: 96
1jlf A - percentage of sequence identity: 96
1jlg A - percentage of sequence identity: 96
1jlq A - percentage of sequence identity: 96
1klm A - percentage of sequence identity: 96
1lw0 A - percentage of sequence identity: 96
1lw2 A - percentage of sequence identity: 96
1lwc A - percentage of sequence identity: 96
1lwe A - percentage of sequence identity: 96
1lwf A - percentage of sequence identity: 96
1mu2 A - percentage of sequence identity: 62
1n5y A - percentage of sequence identity: 100
1n6q A - percentage of sequence identity: 100
1o1w A - percentage of sequence identity: 96
1qe1 A - percentage of sequence identity: 100
1r0a A - percentage of sequence identity: 100
1rdh A - percentage of sequence identity: 100
1rdh B - percentage of sequence identity: 100
1rev A - percentage of sequence identity: 96
1rt1 A - percentage of sequence identity: 96
1rt2 A - percentage of sequence identity: 96
1rt3 A - percentage of sequence identity: 96
1rt4 A - percentage of sequence identity: 96
1rt5 A - percentage of sequence identity: 96
1rt6 A - percentage of sequence identity: 96
1rt7 A - percentage of sequence identity: 96
1rtd A - percentage of sequence identity: 97
1rtd C - percentage of sequence identity: 97
1rth A - percentage of sequence identity: 96
1rti A - percentage of sequence identity: 96
1rtj A - percentage of sequence identity: 96
1s1t A - percentage of sequence identity: 96
1s1u A - percentage of sequence identity: 96
1s1v A - percentage of sequence identity: 96
1s1w A - percentage of sequence identity: 96
1s1x A - percentage of sequence identity: 96
1s6p A - percentage of sequence identity: 100
1s6q A - percentage of sequence identity: 100
1s9e A - percentage of sequence identity: 100
1s9g A - percentage of sequence identity: 100
1suq A - percentage of sequence identity: 100
1sv5 A - percentage of sequence identity: 100
1t03 A - percentage of sequence identity: 100
1t05 A - percentage of sequence identity: 100
1tkt A - percentage of sequence identity: 96
1tkx A - percentage of sequence identity: 96
1tkz A - percentage of sequence identity: 96
1tl1 A - percentage of sequence identity: 96
1tl3 A - percentage of sequence identity: 96
1tv6 A - percentage of sequence identity: 100
1tvr A - percentage of sequence identity: 100
1uwb A - percentage of sequence identity: 100
1vrt A - percentage of sequence identity: 96
1vru A - percentage of sequence identity: 96
2b5j A - percentage of sequence identity: 100
2b6a A - percentage of sequence identity: 100
2ban A - percentage of sequence identity: 100
2be2 A - percentage of sequence identity: 100
2hmi A - percentage of sequence identity: 100
3hvt A - percentage of sequence identity: 100