PDB: 1i2a Compound: 50s ribosomal protein l1p Classification: RIBOSOME Entry date in PDB: 2003-12-09 Resolution [Å]: 1.85 R-Factor: 0.222

CHAIN: A SWISS-PROT/TREMBL: P54050    KEYWORD: 3D-structure    Complete proteome    Ribosomal protein    RNA-binding    rRNA-binding    SCOP: e.24.1.1 Multi-domain proteins (alpha and beta)    Ribosomal protein L1    Ribosomal protein L1    Ribosomal protein L1    Ribosomal protein L1    Archaeon Methanococcus jannaschii GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1i2a_A_196 - HA => SUBCLASS : 5.33.1
1i2a_A_78 - EH => SUBCLASS : 1.1.8
1i2a_A_104 - EH => SUBCLASS : 1.1.17
1i2a_A_104 - EH => SUBCLASS : 1.3.1
1i2a_A_159 - EH => SUBCLASS : 5.1.1
1i2a_A_82 - HH => SUBCLASS : 1.2.1
1i2a_A_82 - HH => SUBCLASS : 1.2.2

Loops in ArchDB95 clusters

1i2a_A_78 - EH => SUBCLASS : 1.1.14
1i2a_A_78 - EH => SUBCLASS : 1.1.29
1i2a_A_104 - EH => SUBCLASS : 1.2.1
1i2a_A_104 - EH => SUBCLASS : 1.2.2
1i2a_A_131 - EH => SUBCLASS : 4.2.5
1i2a_A_159 - EH => SUBCLASS : 4.2.6
1i2a_A_82 - HH => SUBCLASS : 1.2.1
1i2a_A_196 - HA => SUBCLASS : 5.44.1

Loops not clustered in ArchDB

1i2a_A_25 - AR
1i2a_A_45 - AR
1i2a_A_149 - AR
1i2a_A_60 - EH
1i2a_A_171 - HE
1i2a_A_140 - HE
1i2a_A_120 - HE
1i2a_A_92 - HE
1i2a_A_66 - HE
1i2a_A_3 - HE
1i2a_A_112 - HH

1cjs A - percentage of sequence identity: 100
1dwu A - percentage of sequence identity: 72
1dwu B - percentage of sequence identity: 72
1u63 A - percentage of sequence identity: 100
1u63 C - percentage of sequence identity: 100