PDB: 1i52 Compound: 4-diphosphocytidyl-2-c-methylerythritol synthase Classification: TRANSFERASE Entry date in PDB: 2001-07-11 Resolution [Å]: 1.50 R-Factor: 0.227

CHAIN: A SWISS-PROT/TREMBL: Q46893    KEYWORD: 3D-structure    Cobalt    Complete proteome    Isoprene biosynthesis    Magnesium    Manganese    Nucleotidyltransferase    Transferase    EC: 2.7.7.60 SCOP: c.68.1.13 Alpha and beta proteins (a/b)    Nucleotide-diphospho-sugar transferases    Nucleotide-diphospho-sugar transferases    Cytidylytransferase    4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP)    Escherichia coli GO:  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity    4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity    isoprenoid biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1i52_A_191 - HE => SUBCLASS : 3.2.1
1i52_A_37 - HE => SUBCLASS : 3.3.1
1i52_A_85 - HE => SUBCLASS : 4.39.1
1i52_A_31 - HA => SUBCLASS : 2.3.1
1i52_A_141 - HA => SUBCLASS : 6.4.1
1i52_A_161 - EH => SUBCLASS : 0.1.76
1i52_A_76 - EH => SUBCLASS : 4.18.1
1i52_A_76 - EH => SUBCLASS : 4.25.1
1i52_A_101 - EH => SUBCLASS : 7.15.1
1i52_A_101 - EH => SUBCLASS : 8.4.1
1i52_A_131 - AR => SUBCLASS : 4.5.1
1i52_A_8 - AR => SUBCLASS : 16.1.1
1i52_A_171 - HH => SUBCLASS : 6.27.1

Loops in ArchDB95 clusters

1i52_A_161 - EH => SUBCLASS : 0.1.72
1i52_A_76 - EH => SUBCLASS : 2.1.24
1i52_A_76 - EH => SUBCLASS : 4.3.1
1i52_A_131 - AR => SUBCLASS : 3.1.6
1i52_A_131 - AR => SUBCLASS : 3.7.1
1i52_A_151 - AR => SUBCLASS : 5.71.1
1i52_A_171 - HH => SUBCLASS : 6.24.1
1i52_A_191 - HE => SUBCLASS : 3.5.1
1i52_A_37 - HE => SUBCLASS : 3.6.1
1i52_A_85 - HE => SUBCLASS : 4.72.1
1i52_A_31 - HA => SUBCLASS : 2.3.2
1i52_A_141 - HA => SUBCLASS : 6.5.1

Loops in ArchDB-EC clusters

1i52_A_171 - HH => SUBCLASS : 6.21.1

Loops not clustered in ArchDB

1i52_A_151 - AR
1i52_A_131 - AR
1i52_A_8 - AR
1i52_A_35 - EH
1i52_A_203 - EH
1i52_A_51 - HA
1i52_A_51 - HA
1i52_A_141 - HA
1i52_A_31 - HA
1i52_A_114 - HE

1h3m A - percentage of sequence identity: 99
1h3m B - percentage of sequence identity: 99
1ini A - percentage of sequence identity: 100
1inj A - percentage of sequence identity: 100
1vgt A - percentage of sequence identity: 99
1vgt B - percentage of sequence identity: 99
1vgu A - percentage of sequence identity: 99
1vgu B - percentage of sequence identity: 99