PDB: 1i7d Compound: DNA topoisomerase iii Classification: ISOMERASE/DNA Entry date in PDB: 2001-06-29 Resolution [Å]: 2.05 R-Factor: 0.233

CHAIN: A SWISS-PROT/TREMBL: P14294    KEYWORD: 3D-structure    Complete proteome    DNA-binding    Isomerase    Topoisomerase    EC: 5.99.1.2 SCOP: e.10.1.1 Multi-domain proteins (alpha and beta)    Prokaryotic type I DNA topoisomerase    Prokaryotic type I DNA topoisomerase    Prokaryotic type I DNA topoisomerase    DNA topoisomerase III    Escherichia coli GO:  chromosome    DNA binding    DNA topoisomerase activity    DNA topoisomerase type I activity    nucleic acid binding    DNA modification    DNA topological change    DNA unwinding

Image Source: PDB

Loops in ArchDB40 clusters

1i7d_A_29 - HA => SUBCLASS : 2.1.1
1i7d_A_29 - HA => SUBCLASS : 2.1.3
1i7d_A_24 - HA => SUBCLASS : 2.6.1
1i7d_A_220 - HA => SUBCLASS : 5.1.1
1i7d_A_220 - HA => SUBCLASS : 5.1.5
1i7d_A_418 - HA => SUBCLASS : 5.13.1
1i7d_A_46 - EH => SUBCLASS : 1.1.4
1i7d_A_75 - EH => SUBCLASS : 1.1.26
1i7d_A_2 - EH => SUBCLASS : 2.1.1
1i7d_A_97 - EH => SUBCLASS : 4.25.2
1i7d_A_97 - EH => SUBCLASS : 5.52.1
1i7d_A_273 - AR => SUBCLASS : 1.1.12
1i7d_A_563 - HH => SUBCLASS : 1.1.16
1i7d_A_294 - HH => SUBCLASS : 3.1.1
1i7d_A_569 - HH => SUBCLASS : 4.1.4

Loops in ArchDB95 clusters

1i7d_A_75 - EH => SUBCLASS : 0.1.9
1i7d_A_75 - EH => SUBCLASS : 0.1.22
1i7d_A_2 - EH => SUBCLASS : 2.1.1
1i7d_A_46 - EH => SUBCLASS : 2.2.1
1i7d_A_97 - EH => SUBCLASS : 4.13.1
1i7d_A_273 - AR => SUBCLASS : 1.2.13
1i7d_A_563 - HH => SUBCLASS : 1.2.36
1i7d_A_294 - HH => SUBCLASS : 3.1.1
1i7d_A_569 - HH => SUBCLASS : 4.1.1
1i7d_A_29 - HA => SUBCLASS : 2.1.1
1i7d_A_29 - HA => SUBCLASS : 2.1.4
1i7d_A_24 - HA => SUBCLASS : 2.4.1
1i7d_A_220 - HA => SUBCLASS : 3.1.1
1i7d_A_220 - HA => SUBCLASS : 5.1.4
1i7d_A_220 - HA => SUBCLASS : 5.1.5

Loops in ArchDB-EC clusters

1i7d_A_569 - HH => SUBCLASS : 4.1.4

Loops not clustered in ArchDB

1i7d_A_36 - AR
1i7d_A_434 - AR
1i7d_A_460 - AR
1i7d_A_472 - AR
1i7d_A_36 - AR
1i7d_A_273 - AR
1i7d_A_434 - AR
1i7d_A_460 - AR
1i7d_A_472 - AR
1i7d_A_130 - EH
1i7d_A_150 - EH
1i7d_A_547 - EH
1i7d_A_491 - EH
1i7d_A_235 - EH
1i7d_A_278 - EH
1i7d_A_438 - HA
1i7d_A_541 - HA
1i7d_A_24 - HA
1i7d_A_29 - HA
1i7d_A_220 - HA
1i7d_A_418 - HA
1i7d_A_438 - HA
1i7d_A_541 - HA
1i7d_A_397 - HE
1i7d_A_199 - HE
1i7d_A_528 - HE
1i7d_A_139 - HE
1i7d_A_123 - HE
1i7d_A_82 - HE
1i7d_A_51 - HE
1i7d_A_9 - HE
1i7d_A_259 - HE
1i7d_A_552 - HH
1i7d_A_106 - HH
1i7d_A_156 - HH
1i7d_A_309 - HH
1i7d_A_344 - HH
1i7d_A_510 - HH
1i7d_A_493 - HH

1d6m A - percentage of sequence identity: 99