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Information on 1i8d
PDB: 1i8d
Compound: riboflavin synthase
Classification: TRANSFERASE
Entry date in PDB: 2001-09-19
Resolution [Å]: 2.00
R-Factor: 0.239


CHAIN: A
SWISS-PROT/TREMBL: P29015
   KEYWORD: 3D-structure    Complete proteome    Repeat    Riboflavin biosynthesis    Transferase   
EC: 2.5.1.9
SCOP: b.43.4.3 All beta proteins    Reductase/isomerase/elongation factor common domain    Riboflavin synthase domain-like    Riboflavin synthase    Riboflavin synthase    Escherichia coli
SCOP: b.43.4.3 All beta proteins    Reductase/isomerase/elongation factor common domain    Riboflavin synthase domain-like    Riboflavin synthase    Riboflavin synthase    Escherichia coli
GO:  


CHAIN: B
SWISS-PROT/TREMBL: P29015
   KEYWORD: 3D-structure    Complete proteome    Repeat    Riboflavin biosynthesis    Transferase   
EC: 2.5.1.9
SCOP: b.43.4.3 All beta proteins    Reductase/isomerase/elongation factor common domain    Riboflavin synthase domain-like    Riboflavin synthase    Riboflavin synthase    Escherichia coli
SCOP: b.43.4.3 All beta proteins    Reductase/isomerase/elongation factor common domain    Riboflavin synthase domain-like    Riboflavin synthase    Riboflavin synthase    Escherichia coli
GO:  


CHAIN: C
SWISS-PROT/TREMBL: P29015
   KEYWORD: 3D-structure    Complete proteome    Repeat    Riboflavin biosynthesis    Transferase   
EC: 2.5.1.9
SCOP: b.43.4.3 All beta proteins    Reductase/isomerase/elongation factor common domain    Riboflavin synthase domain-like    Riboflavin synthase    Riboflavin synthase    Escherichia coli
SCOP: b.43.4.3 All beta proteins    Reductase/isomerase/elongation factor common domain    Riboflavin synthase domain-like    Riboflavin synthase    Riboflavin synthase    Escherichia coli
GO:  
1i8d Image
Image Source: PDB

Stored Loops of 1i8d

Loops in ArchDB40 clusters

1i8d_A_139 - HA => SUBCLASS : 2.1.1
1i8d_A_8 - HA => SUBCLASS : 2.2.7
1i8d_A_156 - EH => SUBCLASS : 0.1.3
1i8d_A_58 - EH => SUBCLASS : 0.1.9
1i8d_A_156 - EH => SUBCLASS : 1.1.2
1i8d_A_156 - EH => SUBCLASS : 1.1.3

Loops in ArchDB95 clusters

1i8d_A_58 - EH => SUBCLASS : 0.1.8
1i8d_A_156 - EH => SUBCLASS : 1.1.5
1i8d_A_8 - HA => SUBCLASS : 2.2.3
1i8d_A_47 - HA => SUBCLASS : 2.3.4

Loops in ArchDB-EC clusters

1i8d_A_47 - HA => SUBCLASS : 2.3.3

Loops not clustered in ArchDB

1i8d_A_145 - AR
1i8d_A_118 - AR
1i8d_A_81 - AR
1i8d_A_21 - AR
1i8d_A_21 - AR
1i8d_A_81 - AR
1i8d_A_118 - AR
1i8d_A_145 - AR
1i8d_A_179 - EH
1i8d_A_105 - HA
1i8d_A_41 - HA
1i8d_A_41 - HA
1i8d_A_47 - HA
1i8d_A_105 - HA
1i8d_A_139 - HA
1i8d_A_8 - HA
1i8d_A_163 - HE
1i8d_A_65 - HE

Homologous structures to 1i8d classified in ArchDB

1hze A - percentage of sequence identity: 100
1hze B - percentage of sequence identity: 100
1i18 A - percentage of sequence identity: 100
1i18 B - percentage of sequence identity: 100
1i8d A - percentage of sequence identity: 100
1i8d B - percentage of sequence identity: 100
1i8d C - percentage of sequence identity: 100
1pkv A - percentage of sequence identity: 100
1pkv B - percentage of sequence identity: 100