PDB: 1iz9 Compound: malate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 2002-10-16 Resolution [Å]: 2.00 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: P10584    KEYWORD: 3D-structure    NAD    Oxidoreductase    Tricarboxylic acid cycle    EC: 1.1.1.37 SCOP: c.2.1.5 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    LDH N-terminal domain-like    Malate dehydrogenase    Thermus thermophilus SCOP: d.162.1.1 Alpha and beta proteins (a+b)    LDH C-terminal domain-like    LDH C-terminal domain-like    Lactate & malate dehydrogenases, C-terminal domain    Malate dehydrogenase    Thermus thermophilus GO:  L-lactate dehydrogenase activity    malate dehydrogenase activity    oxidoreductase activity    glycolysis    malate metabolism    tricarboxylic acid cycle intermediate metabolism    CHAIN: B SWISS-PROT/TREMBL: P10584    KEYWORD: 3D-structure    NAD    Oxidoreductase    Tricarboxylic acid cycle    EC: 1.1.1.37 SCOP: c.2.1.5 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    LDH N-terminal domain-like    Malate dehydrogenase    Thermus thermophilus SCOP: d.162.1.1 Alpha and beta proteins (a+b)    LDH C-terminal domain-like    LDH C-terminal domain-like    Lactate & malate dehydrogenases, C-terminal domain    Malate dehydrogenase    Thermus thermophilus GO:  L-lactate dehydrogenase activity    malate dehydrogenase activity    oxidoreductase activity    glycolysis    malate metabolism    tricarboxylic acid cycle intermediate metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1iz9_A_36 - EH => SUBCLASS : 1.1.10
1iz9_A_5 - EH => SUBCLASS : 4.7.1
1iz9_A_290 - EH => SUBCLASS : 7.45.1
1iz9_A_83 - EH => SUBCLASS : 11.8.1
1iz9_A_178 - AR => SUBCLASS : 1.1.3
1iz9_A_178 - AR => SUBCLASS : 2.5.3
1iz9_A_192 - AR => SUBCLASS : 3.2.1
1iz9_A_47 - HE => SUBCLASS : 4.7.2
1iz9_A_74 - HE => SUBCLASS : 4.25.1
1iz9_A_98 - HE => SUBCLASS : 5.1.1
1iz9_A_157 - HE => SUBCLASS : 6.1.1
1iz9_A_15 - HE => SUBCLASS : 9.5.1
1iz9_A_182 - HA => SUBCLASS : 7.10.1

Loops not clustered in ArchDB

1iz9_A_152 - EH
1iz9_A_203 - EH
1iz9_A_65 - EH
1iz9_A_125 - EH
1iz9_A_199 - HA
1iz9_A_279 - HA
1iz9_A_262 - HA
1iz9_A_133 - HE
1iz9_A_238 - HE
1iz9_A_211 - HH
1iz9_A_218 - HH

1b8p A - percentage of sequence identity: 61
1b8u A - percentage of sequence identity: 61
1b8v A - percentage of sequence identity: 61
1bdm A - percentage of sequence identity: 99
1bdm B - percentage of sequence identity: 99
1bmd A - percentage of sequence identity: 99
1bmd B - percentage of sequence identity: 99
1iz9 A - percentage of sequence identity: 100
1iz9 B - percentage of sequence identity: 100
1y7t A - percentage of sequence identity: 100
1y7t B - percentage of sequence identity: 100
2cvq A - percentage of sequence identity: 100
2cvq B - percentage of sequence identity: 100