PDB: 1izn Compound: capz alpha-1 subunit Classification: PROTEIN BINDING Entry date in PDB: 2003-04-08 Resolution [Å]: 2.10 R-Factor: 0.222

CHAIN: A SWISS-PROT/TREMBL: P13127    KEYWORD: 3D-structure    Actin capping    Actin-binding    Multigene family    SCOP: e.43.1.1 Multi-domain proteins (alpha and beta)    Subunits of heterodimeric actin filament capping protein Capz    Subunits of heterodimeric actin filament capping protein Capz    Capz alpha-1 subunit    Capz alpha-1 subunit    Chicken (Gallus gallus) GO:  F-actin capping protein complex    actin binding    actin cytoskeleton organization and biogenesis    CHAIN: B SWISS-PROT/TREMBL: P14315    KEYWORD: 3D-structure    Actin capping    Actin-binding    Alternative splicing    Cytoskeleton    SCOP: e.43.1.2 Multi-domain proteins (alpha and beta)    Subunits of heterodimeric actin filament capping protein Capz    Subunits of heterodimeric actin filament capping protein Capz    Capz beta-1 subunit    Capz beta-1 subunit    Chicken (Gallus gallus) GO:  F-actin capping protein complex    actin binding    actin cytoskeleton organization and biogenesis    CHAIN: C SWISS-PROT/TREMBL: P13127    KEYWORD: 3D-structure    Actin capping    Actin-binding    Multigene family    SCOP: e.43.1.1 Multi-domain proteins (alpha and beta)    Subunits of heterodimeric actin filament capping protein Capz    Subunits of heterodimeric actin filament capping protein Capz    Capz alpha-1 subunit    Capz alpha-1 subunit    Chicken (Gallus gallus) GO:  F-actin capping protein complex    actin binding    actin cytoskeleton organization and biogenesis    CHAIN: D SWISS-PROT/TREMBL: P14315    KEYWORD: 3D-structure    Actin capping    Actin-binding    Alternative splicing    Cytoskeleton    SCOP: e.43.1.2 Multi-domain proteins (alpha and beta)    Subunits of heterodimeric actin filament capping protein Capz    Subunits of heterodimeric actin filament capping protein Capz    Capz beta-1 subunit    Capz beta-1 subunit    Chicken (Gallus gallus) GO:  F-actin capping protein complex    actin binding    actin cytoskeleton organization and biogenesis

Image Source: PDB

Loops in ArchDB40 clusters

1izn_B_116 - HA => SUBCLASS : 2.2.6
1izn_B_66 - HA => SUBCLASS : 2.3.1
1izn_B_164 - HA => SUBCLASS : 3.2.1
1izn_A_86 - HA => SUBCLASS : 4.1.1
1izn_B_48 - HA => SUBCLASS : 4.1.1
1izn_B_70 - HA => SUBCLASS : 4.1.2
1izn_A_86 - HA => SUBCLASS : 4.1.3
1izn_A_151 - HA => SUBCLASS : 4.1.7
1izn_B_70 - HA => SUBCLASS : 6.1.1
1izn_B_57 - AR => SUBCLASS : 3.4.9
1izn_B_57 - AR => SUBCLASS : 4.8.1
1izn_B_21 - HH => SUBCLASS : 1.2.13

Loops in ArchDB95 clusters

1izn_B_57 - AR => SUBCLASS : 3.2.5
1izn_B_21 - HH => SUBCLASS : 1.2.28
1izn_B_3 - HH => SUBCLASS : 2.1.42
1izn_B_116 - HA => SUBCLASS : 2.2.7
1izn_B_66 - HA => SUBCLASS : 2.3.1
1izn_B_164 - HA => SUBCLASS : 3.3.1
1izn_B_48 - HA => SUBCLASS : 4.1.1
1izn_B_70 - HA => SUBCLASS : 4.1.1
1izn_A_86 - HA => SUBCLASS : 4.1.3
1izn_A_86 - HA => SUBCLASS : 4.1.4
1izn_A_151 - HA => SUBCLASS : 4.1.8
1izn_A_185 - HA => SUBCLASS : 4.39.1

Loops not clustered in ArchDB

1izn_A_74 - AR
1izn_B_185 - EH
1izn_B_79 - EH
1izn_A_204 - EH
1izn_A_109 - EH
1izn_A_63 - HA
1izn_B_144 - HA
1izn_B_127 - HA
1izn_A_169 - HA
1izn_A_139 - HA
1izn_A_94 - HA
1izn_B_91 - HE
1izn_B_36 - HE
1izn_A_118 - HE
1izn_A_43 - HE
1izn_A_10 - HH
1izn_A_29 - HH
1izn_A_222 - HH
1izn_A_254 - HH
1izn_B_209 - HH
1izn_B_235 - HH

1izn B - percentage of sequence identity: 100
1izn D - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0