PDB: 1j34 Compound: coagulation factor ix-binding protein a chain Classification: PROTEIN BINDING/BLOOD CLOTTING Entry date in PDB: 2003-07-08 Resolution [Å]: 1.55 R-Factor: 0.183

CHAIN: A SWISS-PROT/TREMBL: P23806    KEYWORD: 3D-structure    Calcium    Lectin    Signal    SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Snake coagglutinin alpha chain    Habu snake (Trimeresurus flavoviridis) GO:  sugar binding    CHAIN: B SWISS-PROT/TREMBL: P23807    KEYWORD: 3D-structure    Calcium    Lectin    Signal    SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Snake coagglutinin beta chain    Habu snake (Trimeresurus flavoviridis) GO:  sugar binding    CHAIN: C SWISS-PROT/TREMBL: P00741    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hemophilia    Hydrolase    Hydroxylation    Plasma    Serine protease    Vitamin K    Zymogen    EC: 3.4.21.22 SCOP: g.32.1.1 Small proteins    GLA-domain    GLA-domain    GLA-domain    Coagulation factor IX (IXa)    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1j34_A_7 - HA => SUBCLASS : 2.4.2
1j34_A_102 - HA => SUBCLASS : 6.15.1
1j34_A_38 - EH => SUBCLASS : 5.10.1
1j34_A_115 - AR => SUBCLASS : 5.4.1

Loops in ArchDB95 clusters

1j34_A_12 - EH => SUBCLASS : 1.1.26
1j34_B_212 - EH => SUBCLASS : 1.1.26
1j34_A_38 - EH => SUBCLASS : 5.7.1
1j34_B_238 - EH => SUBCLASS : 5.7.1
1j34_B_307 - AR => SUBCLASS : 2.2.1
1j34_A_115 - AR => SUBCLASS : 5.4.1
1j34_B_245 - HE => SUBCLASS : 2.8.5
1j34_B_223 - HE => SUBCLASS : 4.9.1
1j34_A_23 - HE => SUBCLASS : 4.9.1
1j34_A_7 - HA => SUBCLASS : 2.5.1
1j34_A_102 - HA => SUBCLASS : 6.11.1

Loops not clustered in ArchDB

1j34_A_66 - HA
1j34_B_207 - HA
1j34_B_263 - HA
1j34_B_295 - HA
1j34_A_45 - HE

1bj3 A - percentage of sequence identity: 100
1dan L - percentage of sequence identity: 65
1fvu C - percentage of sequence identity: 66
1ijk B - percentage of sequence identity: 66
1ixx C - percentage of sequence identity: 85
1ixx E - percentage of sequence identity: 85
1j35 A - percentage of sequence identity: 100
1u0n B - percentage of sequence identity: 66
1u0o A - percentage of sequence identity: 66
1x2t A - percentage of sequence identity: 100
1x2t C - percentage of sequence identity: 100
1x2w A - percentage of sequence identity: 100