PDB: 1j5w Compound: glycyl-trna synthetase alpha chain Classification: LIGASE Entry date in PDB: 2002-07-17 Resolution [Å]: 1.95 R-Factor: 0.197

CHAIN: A SWISS-PROT/TREMBL: Q9WY59    KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Protein biosynthesis    EC: 6.1.1.14 SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Glycyl-tRNA synthetase (GlyRS) alpha chain    Thermotoga maritima GO:  ATP binding    glycine-tRNA ligase activity    glycyl-tRNA aminoacylation    CHAIN: B SWISS-PROT/TREMBL: Q9WY59    KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Protein biosynthesis    EC: 6.1.1.14 SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Glycyl-tRNA synthetase (GlyRS) alpha chain    Thermotoga maritima GO:  ATP binding    glycine-tRNA ligase activity    glycyl-tRNA aminoacylation

Image Source: PDB

Loops in ArchDB40 clusters

1j5w_A_10 - HE => SUBCLASS : 1.1.1
1j5w_A_88 - HE => SUBCLASS : 6.1.1
1j5w_A_178 - HA => SUBCLASS : 2.2.1
1j5w_A_155 - EH => SUBCLASS : 0.1.8
1j5w_A_183 - EH => SUBCLASS : 0.1.64
1j5w_A_206 - HH => SUBCLASS : 2.2.8
1j5w_A_229 - HH => SUBCLASS : 4.5.2

Loops in ArchDB95 clusters

1j5w_A_183 - EH => SUBCLASS : 0.1.3
1j5w_A_206 - HH => SUBCLASS : 2.2.5
1j5w_A_10 - HE => SUBCLASS : 1.1.1
1j5w_A_88 - HE => SUBCLASS : 6.1.2
1j5w_A_88 - HE => SUBCLASS : 8.1.2
1j5w_A_178 - HA => SUBCLASS : 2.2.1
1j5w_A_178 - HA => SUBCLASS : 2.2.6

Loops in ArchDB-EC clusters

1j5w_A_229 - HH => SUBCLASS : 4.1.5

Loops not clustered in ArchDB

1j5w_A_108 - AR
1j5w_A_108 - AR
1j5w_A_20 - EH
1j5w_A_73 - EH
1j5w_A_122 - HA
1j5w_A_116 - HA
1j5w_A_137 - HA
1j5w_A_48 - HA
1j5w_A_137 - HA
1j5w_A_122 - HA
1j5w_A_116 - HA
1j5w_A_48 - HA
1j5w_A_178 - HA
1j5w_A_161 - HE
1j5w_A_36 - HE
1j5w_A_254 - HH
1j5w_A_185 - HH
1j5w_A_3 - HH

1j5w A - percentage of sequence identity: 100
1j5w B - percentage of sequence identity: 100